RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 SFRP5Q5T4F7 317 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 OR52W1Q6IF63 320 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 TMEM156Q8N614 296 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 ZIC4Q8N9L1 334 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 OR56B1Q8NGI3 324 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 C10orf35Q96D05 121 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 SGCZQ96LD1 299 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 ZNF385AQ96PM9 386 aaKnown RBP15.59■□□□□ 0.09
SCARB1-208ENST00000544327 SF3B5Q9BWJ5 86 aaKnown RBP15.59■□□□□ 0.09
SCARB1-208ENST00000544327 TMEM59Q9BXS4 323 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 MFFQ9GZY8 342 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 ZNF160Q9HCG1 818 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.59■□□□□ 0.09
SCARB1-208ENST00000544327 SLC39A1Q9NY26 324 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 FBXO4Q9UKT5 387 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 KIAA1549Q9HCM3 1950 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 E9PLN8 166 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 APOC1P02654 83 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 MPGP29372 298 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 CHAF1BQ13112 559 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 SLC23A3Q6PIS1 610 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 C17orf107Q6ZR85 190 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 C20orf196Q8IYI0 205 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 BEST3Q8N1M1 668 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 FAM89BQ8N5H3 189 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 RAB3CQ96E17 227 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 SPACA5Q96QH8 159 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 CST11Q9H112 138 aa15.59■□□□□ 0.09
SCARB1-208ENST00000544327 NOP16Q9Y3C1 178 aaKnown RBP15.59■□□□□ 0.09
SCARB1-208ENST00000544327 A0A0J9YW62 118 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 hCG_1807616A0A1W2PRN6 198 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 C9orf170A2RU37 121 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 CEACAM18A8MTB9 384 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 I3L521 148 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 MFNGO00587 321 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 DHRS3O75911 302 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 PDGFBP01127 241 aaPredicted RBP15.58■□□□□ 0.08
SCARB1-208ENST00000544327 GP1BAP07359 652 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 CBX5P45973 191 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 PPP1R1AQ13522 171 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 LIN54Q6MZP7 749 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 RGS7BPQ6MZT1 257 aaPredicted RBP15.58■□□□□ 0.08
SCARB1-208ENST00000544327 CRIP3Q6Q6R5 217 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 SLC51BQ86UW2 128 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 HOGA1Q86XE5 327 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 PCNPQ8WW12 178 aaKnown RBP15.58■□□□□ 0.08
SCARB1-208ENST00000544327 UCN2Q96RP3 112 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 OCSTAMPQ9BR26 566 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 URM1Q9BTM9 101 aaKnown RBP15.58■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF224Q9NZL3 707 aa15.58■□□□□ 0.08
SCARB1-208ENST00000544327 COL27A1Q8IZC6 1860 aaPredicted RBP15.58■□□□□ 0.08
SCARB1-208ENST00000544327 A0A0D9SG52 128 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 OR5H14A6NHG9 310 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 OR2AT4A6NND4 320 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 WDPCPO95876 746 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 NMBP08949 121 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 NAT2P11245 290 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 SRD5A2P31213 254 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 TMEM50BP56557 158 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 B3GALT5-AS1P59052 145 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 TAS2R31P59538 309 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 MRPS34P82930 218 aaKnown RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF345Q14585 488 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 RSPO1Q2MKA7 263 aaPredicted RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 RFPL4BQ6ZWI9 263 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 PNLDC1Q8NA58 520 aaKnown RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 OR4K15Q8NH41 348 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 PP6455Q8WZ26 134 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 REG4Q9BYZ8 158 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 C5orf63A6NC05 138 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 FOXI3A8MTJ6 420 aaPredicted RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 SOCS1O15524 211 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 EFSO43281 561 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 IFNA6P05013 189 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 POU3F2P20265 443 aaPredicted RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 M6PRP20645 277 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF84P51523 738 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 RPS27AP62979 156 aaKnown RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 TRIM61Q5EBN2 209 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 FAM27BQ5VT28 67 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF660Q6AZW8 331 aaPredicted RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 RTN4RL2Q86UN3 420 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 ARRDC1Q8N5I2 433 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 KCNE4Q8WWG9 221 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 RBPMSQ93062 196 aaKnown RBP15.57■□□□□ 0.08
SCARB1-208ENST00000544327 FBXW5Q969U6 566 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 GUCD1Q96NT3 240 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 PHB2Q99623 299 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 NUP50Q9UKX7 468 aa15.57■□□□□ 0.08
SCARB1-208ENST00000544327 IGHV3-15A0A0B4J1V0 119 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 OR5H15A6NDH6 313 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 MFSD2BA6NFX1 497 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 G3V3Y1 287 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 MGMTP16455 207 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 RAC3P60763 192 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF468Q5VIY5 522 aaPredicted RBP15.56■□□□□ 0.08
SCARB1-208ENST00000544327 SLC16A14Q7RTX9 510 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 PPP1R32Q7Z5V6 425 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 ZNF546Q86UE3 836 aa15.56■□□□□ 0.08
SCARB1-208ENST00000544327 LRRC20Q8TCA0 184 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms