RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, humanhuman

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP3K4-215ENST00000544041 COL13A1Q5TAT6 717 aaPredicted RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 AKR7LQ8NHP1 331 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 ASB16Q96NS5 453 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 IDSB3KWA1 339 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF273Q14593 569 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 LAMP3Q9UQV4 416 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 SLC17A4Q9Y2C5 497 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 RCL1Q9Y2P8 373 aaKnown RBP12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 WSB1Q9Y6I7 421 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 ARID1AO14497 2285 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
MAP3K4-215ENST00000544041 HIST1H1DP16402 221 aaKnown RBP12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CBLN2Q8IUK8 224 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NAT6Q93015 286 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CHST6Q9GZX3 395 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 GNG12Q9UBI6 72 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 C2orf72A6NCS6 295 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 TCN2P20062 427 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 OTPQ5XKR4 325 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 BTNL8Q6UX41 500 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 SPPL3Q8TCT6 385 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 PP6455Q8WZ26 134 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 HHIPQ96QV1 700 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CLDN34H7C241 214 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CRHP06850 196 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CARD18P57730 90 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 RLN3Q8WXF3 142 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 LMAN1LQ9HAT1 526 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CCDC187A0A096LP49 1063 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 ALOX12BO75342 701 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 GUSBP08236 651 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NMBP08949 121 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 FABP4P15090 132 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF345Q14585 488 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NR0B2Q15466 257 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 OR2AE1Q8NHA4 323 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 KTI12Q96EK9 354 aaPredicted RBP12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 MVB12AQ96EY5 273 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 A0A1W2PPQ1 181 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 RAB5AP20339 215 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 SHBQ15464 509 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 C9orf135Q5VTT2 229 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 LAIR1Q6GTX8 287 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 CATSPERDQ86XM0 798 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 OR4N2Q8NGD1 307 aa12.32□□□□□ -0.44
MAP3K4-215ENST00000544041 SEC14L6B5MCN3 397 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 ICAM2P13598 275 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 THBS4P35443 961 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 SPANXN5Q5MJ07 72 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 EDEM2Q9BV94 578 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 SHARPINQ9H0F6 387 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 TMED3Q9Y3Q3 217 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 GLAP06280 429 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 DTYMKP23919 212 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 NMES1Q9C002 83 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 RASL12Q9NYN1 266 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 KLF15Q9UIH9 416 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 CD207Q9UJ71 328 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 CA14Q9ULX7 337 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 NXPH2O95156 264 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 IGF2P01344 180 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 CDKN2AP42771 156 aaKnown RBP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF90Q03938 601 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 NRASP01111 189 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 HLA-DQB1P01920 261 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 COX5AP20674 150 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 ZNF770Q6IQ21 691 aaPredicted RBP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 LINC01555Q8NAE3 123 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 MRPL38Q96DV4 380 aaKnown RBP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 ALX4Q9H161 411 aaPredicted RBP12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
MAP3K4-215ENST00000544041 H0Y8X5 98 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 KCNAB1Q14722 419 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 PATE1Q8WXA2 126 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 MRGPRX4Q96LA9 322 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 MAGT1Q9H0U3 335 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 G3V3Q6 166 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 SUMO3P55854 103 aaPredicted RBP12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 HTRA3P83110 453 aa12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
MAP3K4-215ENST00000544041 ETFDHQ16134 617 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms