RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 CASTOR1Q8WTX7 329 aa11.92□□□□□ -0.5
PPME1-208ENST00000543525 PHYHIPLQ96FC7 376 aa11.92□□□□□ -0.5
PPME1-208ENST00000543525 GPER1Q99527 375 aa11.92□□□□□ -0.5
PPME1-208ENST00000543525 NICN1Q9BSH3 213 aa11.92□□□□□ -0.5
PPME1-208ENST00000543525 URM1Q9BTM9 101 aaKnown RBP11.92□□□□□ -0.5
PPME1-208ENST00000543525 TMEM59Q9BXS4 323 aa11.92□□□□□ -0.5
PPME1-208ENST00000543525 PNRC2Q9NPJ4 139 aaKnown RBP11.92□□□□□ -0.5
PPME1-208ENST00000543525 ASXL3Q9C0F0 2248 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 A0A087WZY1 265 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 A0A0A6YYD4 124 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 A0A1W2PQM1 296 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 ZNF814B7Z6K7 855 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 LGALS8O00214 317 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 RER1O15258 196 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 DKK1O94907 266 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 SLC2A1P11166 492 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
PPME1-208ENST00000543525 CBX5P45973 191 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 OR3A4PP47883 348 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 INPP5JQ15735 1006 aaPredicted RBP11.91□□□□□ -0.5
PPME1-208ENST00000543525 VAX1Q5SQQ9 334 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 KCTD9Q7L273 389 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 INO80EQ8NBZ0 244 aaPredicted RBP11.91□□□□□ -0.5
PPME1-208ENST00000543525 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
PPME1-208ENST00000543525 FBXW5Q969U6 566 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 SCGB3A2Q96PL1 93 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 ZNF471Q9BX82 626 aaPredicted RBP11.91□□□□□ -0.5
PPME1-208ENST00000543525 DNTTIP1Q9H147 329 aa11.91□□□□□ -0.5
PPME1-208ENST00000543525 K7ESF4 209 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 AVPR2P30518 371 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
PPME1-208ENST00000543525 NUBP1P53384 320 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 CLDN17P56750 224 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 LSM6P62312 80 aaKnown RBP11.9□□□□□ -0.5
PPME1-208ENST00000543525 CYCSP99999 105 aaKnown RBP11.9□□□□□ -0.5
PPME1-208ENST00000543525 LCN10Q6JVE6 187 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 TMPPEQ6ZT21 453 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 ARRDC1Q8N5I2 433 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 WDSUB1Q8N9V3 476 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 PNLDC1Q8NA58 520 aaKnown RBP11.9□□□□□ -0.5
PPME1-208ENST00000543525 OR10K1Q8NGX5 313 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 TERB2Q8NHR7 220 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 MARCH1Q8TCQ1 289 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 CLDN23Q96B33 292 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 PGAM5Q96HS1 289 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
PPME1-208ENST00000543525 ZDBF2Q9HCK1 2354 aa11.9□□□□□ -0.5
PPME1-208ENST00000543525 LY6G6EA0A0G2JKS1 128 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 RNF222A6NCQ9 220 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 C5orf51A6NDU8 294 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 SOCS1O15524 211 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 CRTAPO75718 401 aaPredicted RBP11.9□□□□□ -0.51
PPME1-208ENST00000543525 PRKACBP22694 351 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 CTSSP25774 331 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 ATXN7L3Q14CW9 347 aaPredicted RBP11.9□□□□□ -0.51
PPME1-208ENST00000543525 SGCAQ16586 387 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 MICBQ29980 383 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 PXDC1Q5TGL8 231 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 MOB3CQ70IA8 216 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 ASCL5Q7RTU5 278 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 TMEM104Q8NE00 496 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 OR14K1Q8NGZ2 314 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 OCSTAMPQ9BR26 566 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 SOX7Q9BT81 388 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 ZNF319Q9P2F9 582 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 GHRLQ9UBU3 117 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 GPR160Q9UJ42 338 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 U3KQA8 63 aa11.9□□□□□ -0.51
PPME1-208ENST00000543525 ZFHX2Q9C0A1 2572 aaPredicted RBP11.89□□□□□ -0.51
PPME1-208ENST00000543525 CFAP54Q96N23 3096 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 KMT2EQ8IZD2 1858 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 EEF1E1-BLOC1S5C9J1V9 151 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 SIGLEC6O43699 453 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 RAMP1O60894 148 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 CSNK1A1P48729 337 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 SIGLEC14Q08ET2 396 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 ECH1Q13011 328 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 PLAC9Q5JTB6 97 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 LYSMD4Q5XG99 296 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
PPME1-208ENST00000543525 RNF144BQ7Z419 303 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 MRPS24Q96EL2 167 aaKnown RBP11.89□□□□□ -0.51
PPME1-208ENST00000543525 CDC6Q99741 560 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 OR10A2Q9H208 303 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 BANF2Q9H503 90 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 GAREM1Q9H706 876 aa11.89□□□□□ -0.51
PPME1-208ENST00000543525 NXT1Q9UKK6 140 aaKnown RBP11.89□□□□□ -0.51
PPME1-208ENST00000543525 CHCHD2Q9Y6H1 151 aaPredicted RBP11.89□□□□□ -0.51
PPME1-208ENST00000543525 DBX1A6NMT0 343 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 TSPAN4O14817 238 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 PRF1P14222 555 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 MSR1P21757 451 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 PSMB6P28072 239 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 THBS4P35443 961 aa11.88□□□□□ -0.51
PPME1-208ENST00000543525 SERPINF1P36955 418 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms