RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PCK2Q16822 640 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 OR52W1Q6IF63 320 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TFAP2EQ6VUC0 442 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 OVCH2Q7RTZ1 564 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RPL3LQ92901 407 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TRMT61AQ96FX7 289 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RIMS4Q9H426 269 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 KIF25Q9UIL4 384 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TMEM129A0AVI4 362 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TMEM82A0PJX8 343 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ZC3H12DA2A288 527 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 EML2O95834 649 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 IL7P13232 177 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 NQO2P16083 231 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 NFYAP23511 347 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 CSF2RBP32927 897 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF136P52737 540 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 DLX5P56178 289 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 AKR1C1Q04828 323 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 FOXO1Q12778 655 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF74Q16587 644 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 CST9LP1Q5W188 147 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RPUSD3Q6P087 351 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC51BQ86UW2 128 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 BOD1L2Q8IYS8 172 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RDH10Q8IZV5 341 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ANKRD9Q96BM1 317 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SIGLEC11Q96RL6 698 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 S1PR3Q99500 378 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 MS4A7Q9GZW8 240 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 WDR54Q9H977 334 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC2A9Q9NRM0 540 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 NECAP2Q9NVZ3 263 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 UBQLN2Q9UHD9 624 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TIMM8BQ9Y5J9 83 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ACACAQ13085 2346 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TRDV1A0A1B0GX56 115 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 LRP5LA4QPB2 252 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TRABD2BA6NFA1 517 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 DDOSTP39656 456 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB13P51153 203 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TMPRSS3P57727 454 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 MFGE8Q08431 387 aaPredicted RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 RBMS2Q15434 407 aaKnown RBP6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 FAM198BQ6UWH4 519 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 PLXDC2Q6UX71 529 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 LYPD8Q6UX82 237 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 NOXA1Q86UR1 476 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 FAM109AQ8N4B1 249 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 ELMOD3Q96FG2 381 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 HYLS1Q96M11 299 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 OR5B12Q96R08 314 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 PLEKHF2Q9H8W4 249 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC2A8Q9NY64 477 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 TAS2R4Q9NYW5 299 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 B9D1Q9UPM9 204 aa6.2□□□□□ -1.42
SRGAP1-206ENST00000543397 HSPB2A8KAH6 182 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CTXN2P0C2S0 81 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RRASP10301 218 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 HSPB2Q16082 182 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RIPPLY2Q5TAB7 128 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RHOFQ9HBH0 211 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 MMP25Q9NPA2 562 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 PILRBQ9UKJ0 227 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF318Q5VUA4 2279 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 LRRC37AA6NMS7 1700 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF816-ZNF321PA0A0X1KG74 233 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GABARAPH6UMI1 98 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 TNFSF12O43508 249 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SULT1C4O75897 302 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 LYZL6O75951 148 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GABARAPO95166 117 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CLDN1O95832 211 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 TSPAN15O95858 294 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 FCARP24071 287 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 UQCRFS1P47985 274 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 RAB11AP62491 216 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 MC2RQ01718 297 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ALKBH6Q3KRA9 238 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC25A26Q70HW3 274 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC36A1Q7Z2H8 476 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SYS1Q8N2H4 156 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC35G3Q8N808 338 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 OR10K1Q8NGX5 313 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 TCTEX1D2Q8WW35 142 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 FBXO8Q9NRD0 319 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 C19orf12Q9NSK7 152 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CLEC2DQ9UHP7 191 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 R4GMQ9 66 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF705EA8MWA4 302 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ADAM10O14672 748 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 MED6O75586 246 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 UPK1BO75841 260 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 ZNF26P17031 533 aaPredicted RBP6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 CDAP32320 146 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 GDNFP39905 211 aa6.19□□□□□ -1.42
SRGAP1-206ENST00000543397 HCCSP53701 268 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms