RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 CHST4Q8NCG5 386 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 OR8U1Q8NH10 309 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 RNF128Q8TEB7 428 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 SLC25A44Q96H78 314 aaPredicted RBP8.12□□□□□ -1.11
THBS3-211ENST00000541990 WDR77Q9BQA1 342 aaPredicted RBP8.12□□□□□ -1.11
THBS3-211ENST00000541990 NUDT9Q9BW91 350 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 OR51M1Q9H341 326 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 DHDHQ9UQ10 334 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 SLC5A6Q9Y289 635 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 HIF3AQ9Y2N7 669 aa8.12□□□□□ -1.11
THBS3-211ENST00000541990 CCDC163A0A0D9SF12 145 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 LDLRAD4O15165 306 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 FBXO24O75426 580 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 LY86O95711 162 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SNRNP70P08621 437 aaKnown RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 SPARCP09486 303 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 RNH1P13489 461 aaKnown RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 FOLR2P14207 255 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 GNB3P16520 340 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 RAB38P57729 211 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 PRPS1P60891 318 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 RASGEF1BQ0VAM2 473 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SLC17A1Q14916 467 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 EBPQ15125 230 aaKnown RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 SGCAQ16586 387 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ADGRE4PQ86SQ3 457 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 FOXRED2Q8IWF2 684 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SAMD14Q8IZD0 417 aaPredicted RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 SLC43A2Q8N370 569 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ADAMTS17Q8TE56 1095 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SLC25A43Q8WUT9 341 aaPredicted RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 GRHPRQ9UBQ7 328 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 CACFD1Q9UGQ2 172 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SUSD2Q9UGT4 822 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 C17orf105B2RV13 164 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 NPIPB9F8W1W9 429 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 RAB27BO00194 218 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 CDX4O14627 284 aaPredicted RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 MPZL1O95297 269 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ARG1P05089 322 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ACKR3P25106 362 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 CFPP27918 469 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 HOXA6P31267 233 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 GRK6P43250 576 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ZNF260Q3ZCT1 412 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 ZNF550Q7Z398 422 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 LILRB2Q8N423 598 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 OTOSQ8NHW6 89 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 VSTM2LQ96N03 204 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 OR8B4Q96RC9 309 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 PAPOLGQ9BWT3 736 aaKnown RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 EGLN1Q9GZT9 426 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 MMP25Q9NPA2 562 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 SMCO4Q9NRQ5 59 aa8.11□□□□□ -1.11
THBS3-211ENST00000541990 MRPL22Q9NWU5 206 aaKnown RBP8.11□□□□□ -1.11
THBS3-211ENST00000541990 AKAP13Q12802 2813 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 MED19A0JLT2 244 aaPredicted RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 SERINC4A6NH21 518 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 SCRG1O75711 98 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 S100A8P05109 93 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 CELA2AP08217 269 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 AGAP20933 346 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 TACR3P29371 465 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 RPS18P62269 152 aaKnown RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 SSBP1Q04837 148 aaKnown RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 EGR3Q06889 387 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 UNC119Q13432 240 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 AWAT1Q58HT5 328 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 EEF1A1P5Q5VTE0 462 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 D2HGDHQ8N465 521 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 C16orf52Q8NHV5 167 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 AQP3Q92482 292 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 OR10C1Q96KK4 312 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 SULT4A1Q9BR01 284 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 RHBDD3Q9Y3P4 386 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 TRBV6-7A0A0A0MS04 114 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 ZNF432O94892 652 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 NSA2O95478 260 aaKnown RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 CD5P06127 495 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 FCGR3AP08637 254 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 ASAH2BP0C7U1 165 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 ZNF14P17017 642 aaPredicted RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 IGFBP3P17936 291 aaPredicted RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 ZNF10P21506 573 aaPredicted RBP8.1□□□□□ -1.11
THBS3-211ENST00000541990 NPY4RP50391 375 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 RAB32Q13637 225 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 ISXQ2M1V0 245 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 OR2A2Q6IF42 318 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 DHRS13Q6UX07 377 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 DRAM2Q6UX65 266 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 CLEC9AQ6UXN8 241 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 SEMA6DQ8NFY4 1073 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 SMIM8Q96KF7 97 aa8.1□□□□□ -1.11
THBS3-211ENST00000541990 DGAT2Q96PD7 388 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms