RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GADD45AP24522 165 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ACKR3P25106 362 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 GLRXP35754 106 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 CRYBB2P43320 205 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 SOX2P48431 317 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 GSK3AP49840 483 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 FABP5Q01469 135 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 MALLQ13021 153 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 BLMHQ13867 455 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 TMEM244Q5VVB8 128 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 OR2T2Q6IF00 324 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 RGS7BPQ6MZT1 257 aaPredicted RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 FBXW12Q6X9E4 464 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ZNF704Q6ZNC4 412 aaPredicted RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 TMEM91Q6ZNR0 172 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 SATL1Q86VE3 508 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 NUP37Q8NFH4 326 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 OR5L1Q8NGL2 311 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 OR14K1Q8NGZ2 314 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 KLF14Q8TD94 323 aaPredicted RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 TMEM171Q8WVE6 324 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 RPL3LQ92901 407 aaKnown RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 TRMT61AQ96FX7 289 aaKnown RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 PSMG3-AS1Q96PY0 264 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 BCL2L14Q9BZR8 327 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 NAA50Q9GZZ1 169 aaKnown RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 OR51E2Q9H255 320 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 PPP1R3EQ9H7J1 279 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 MYEF2Q9P2K5 600 aaKnown RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 RNF115Q9Y4L5 304 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 SPEF1Q9Y4P9 236 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ELOA3CA0A087WX78 387 aaPredicted RBP8□□□□□ -1.13
DDX55-208ENST00000541259 TRBV5-5A0A0J9YX44 114 aa8□□□□□ -1.13
DDX55-208ENST00000541259 hCG_38984A0A1B0GV85 526 aa8□□□□□ -1.13
DDX55-208ENST00000541259 A6NNC1 897 aa8□□□□□ -1.13
DDX55-208ENST00000541259 J3QW42 95 aa8□□□□□ -1.13
DDX55-208ENST00000541259 GPX5O75715 221 aa8□□□□□ -1.13
DDX55-208ENST00000541259 GHRHP01286 108 aa8□□□□□ -1.13
DDX55-208ENST00000541259 ZNF250P15622 560 aa8□□□□□ -1.13
DDX55-208ENST00000541259 GABRA5P31644 462 aa8□□□□□ -1.13
DDX55-208ENST00000541259 PSG7Q13046 419 aa8□□□□□ -1.13
DDX55-208ENST00000541259 ADIPOQQ15848 244 aa8□□□□□ -1.13
DDX55-208ENST00000541259 ZNF718Q3SXZ3 478 aa8□□□□□ -1.13
DDX55-208ENST00000541259 ACSM3Q53FZ2 586 aa8□□□□□ -1.13
DDX55-208ENST00000541259 DMRTC1Q5HYR2 192 aa8□□□□□ -1.13
DDX55-208ENST00000541259 FAM27D1Q5T7N8 215 aa8□□□□□ -1.13
DDX55-208ENST00000541259 HIST2H2BCQ6DN03 193 aa8□□□□□ -1.13
DDX55-208ENST00000541259 UNQ9370/PRO34162Q6UXP9 181 aa8□□□□□ -1.13
DDX55-208ENST00000541259 Q6ZSR3 168 aa8□□□□□ -1.13
DDX55-208ENST00000541259 PGAP1Q75T13 922 aa8□□□□□ -1.13
DDX55-208ENST00000541259 DOK3Q7L591 496 aa8□□□□□ -1.13
DDX55-208ENST00000541259 MRPL21Q7Z2W9 205 aaKnown RBP8□□□□□ -1.13
DDX55-208ENST00000541259 GPR141Q7Z602 305 aa8□□□□□ -1.13
DDX55-208ENST00000541259 OR5AS1Q8N127 324 aa8□□□□□ -1.13
DDX55-208ENST00000541259 TSEN15Q8WW01 171 aaKnown RBP8□□□□□ -1.13
DDX55-208ENST00000541259 AKAP1Q92667 903 aaKnown RBP eCLIP8□□□□□ -1.13
DDX55-208ENST00000541259 FGGYQ96C11 551 aa8□□□□□ -1.13
DDX55-208ENST00000541259 HAVCR1Q96D42 359 aa8□□□□□ -1.13
DDX55-208ENST00000541259 OR14A2Q96R54 314 aa8□□□□□ -1.13
DDX55-208ENST00000541259 SYT3Q9BQG1 590 aa8□□□□□ -1.13
DDX55-208ENST00000541259 FUNDC2Q9BWH2 189 aa8□□□□□ -1.13
DDX55-208ENST00000541259 MRPL37Q9BZE1 423 aaKnown RBP8□□□□□ -1.13
DDX55-208ENST00000541259 PPIL3Q9H2H8 161 aaKnown RBP8□□□□□ -1.13
DDX55-208ENST00000541259 RGCCQ9H4X1 137 aa8□□□□□ -1.13
DDX55-208ENST00000541259 RNF167Q9H6Y7 350 aa8□□□□□ -1.13
DDX55-208ENST00000541259 CA10Q9NS85 328 aa8□□□□□ -1.13
DDX55-208ENST00000541259 KCNN3Q9UGI6 736 aa8□□□□□ -1.13
DDX55-208ENST00000541259 POU2F3Q9UKI9 436 aa8□□□□□ -1.13
DDX55-208ENST00000541259 HHLA2Q9UM44 414 aa8□□□□□ -1.13
DDX55-208ENST00000541259 PIGLQ9Y2B2 252 aa8□□□□□ -1.13
DDX55-208ENST00000541259 V9GYS6 101 aa8□□□□□ -1.13
DDX55-208ENST00000541259 PTPN13Q12923 2485 aa8□□□□□ -1.13
DDX55-208ENST00000541259 FAM221AA4D161 298 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GGT3PA6NGU5 568 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CD300LBA8K4G0 201 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 ZNF879B4DU55 563 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 H3BSA7 217 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GABRPO00591 440 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 PIN1P1O15428 100 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 SC5DO75845 299 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 DHRS3O75911 302 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 RGS9O75916 674 aaPredicted RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 OR4A8P0C604 315 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 OCM2P0CE71 109 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 COX6B1P14854 86 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 RAC2P15153 192 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 FAHP16930 419 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CD53P19397 219 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GCH1P30793 250 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 TGFBR1P36897 503 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 LSM3P62310 102 aaKnown RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 OR8B8Q15620 311 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 ZNF672Q499Z4 452 aaPredicted RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 YIF1BQ5BJH7 314 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 LCE2CQ5TA81 110 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 GPR107Q5VW38 600 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 MBNL2Q5VZF2 373 aaKnown RBP7.99□□□□□ -1.13
DDX55-208ENST00000541259 ASPHD2Q6ICH7 369 aa7.99□□□□□ -1.13
DDX55-208ENST00000541259 CD200R1LQ6Q8B3 271 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms