RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 COMMD2Q86X83 199 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 CELF2-AS1Q8N7Q2 184 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF555Q8NEP9 628 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 OR2T27Q8NH04 317 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 OR8S1Q8NH09 359 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 RNFT2Q96EX2 444 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 LYZL4Q96KX0 146 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 SIGLEC11Q96RL6 698 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 PAPOLGQ9BWT3 736 aaKnown RBP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 PBOV1Q9GZY1 135 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ZNF665Q9H7R5 613 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 UFSP2Q9NUQ7 469 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 FAM118AQ9NWS6 357 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 SMPD3Q9NY59 655 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 AASSQ9UDR5 926 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 MRM2Q9UI43 246 aaKnown RBP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 KCNS2Q9ULS6 477 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.78□□□□□ -1.16
SNHG1-215ENST00000540904 RHBDD3Q9Y3P4 386 aa7.78□□□□□ -1.16
SNHG1-215ENST00000540904 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 HIVEP2P31629 2446 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-215ENST00000540904 A0A0U1RQV5 110 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 LOC110117498-PIK3R3F6TDL0 507 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 IFNL4K9M1U5 179 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 DLGAP1O14490 977 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 CRLF1O75462 422 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 RPP14O95059 124 aaKnown RBP7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PNPP00491 289 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 IGHV2-70P01814 119 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 IGHV2-5P01817 119 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 KRT8P05787 483 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 IRF2P14316 349 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 ACKR3P25106 362 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PEX2P28328 305 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 GNALP38405 381 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PMELP40967 661 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 CD200P41217 278 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 GATA4P43694 442 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 BTG1P62324 171 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 ZMYND11Q15326 602 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 OR8B8Q15620 311 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 OCLNQ16625 522 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 SLC25A30Q5SVS4 291 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 MEDAGQ5VYS4 303 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 KLBQ86Z14 1044 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 ENTHD1Q8IYW4 607 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 FTMTQ8N4E7 242 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 YIPF7Q8N8F6 280 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 SPERTQ8NA61 448 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 CSNK2A3Q8NEV1 391 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 OR11L1Q8NGX0 322 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 OR51E1Q8TCB6 317 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PPP1R14AQ96A00 147 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 RAB39BQ96DA2 213 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 POM121Q96HA1 1249 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 C1orf159Q96HA4 380 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 FAM71F1Q96KD3 344 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PPP1R3EQ9H7J1 279 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 FN3KRPQ9HA64 309 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF391Q9UJN7 358 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 OR52A1Q9UKL2 312 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 PCDHB10Q9UN67 800 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 R4GMQ9 66 aa7.77□□□□□ -1.17
SNHG1-215ENST00000540904 ABCA1O95477 2261 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 DAPL1A0PJW8 107 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 METTL15A6NJ78 407 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 A6NLC8 198 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 ANXA2P2A6NMY6 339 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 SNTNA6NMZ2 147 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 SLC16A6O15403 523 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 MPZL2O60487 215 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 FAM20BO75063 409 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
SNHG1-215ENST00000540904 TTRP02766 147 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 MSMBP08118 114 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 GABRB1P18505 474 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 MDH2P40926 338 aaKnown RBP7.76□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF91Q05481 1191 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 MZT1Q08AG7 82 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 PRDX4Q13162 271 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 SNCBQ16143 134 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 ZNF181Q2M3W8 571 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 CHRFAM7AQ494W8 412 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 FAM201AQ5SY85 155 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 BCL2L15Q5TBC7 163 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 IL17RELQ6ZVW7 336 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 GLCCI1Q86VQ1 547 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 LRRC28Q86X40 367 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-215ENST00000540904 C1orf87Q8N0U7 546 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 KLHL36Q8N4N3 616 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 OR51F2Q8NH61 342 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 RHOXF1Q8NHV9 184 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 CYGBQ8WWM9 190 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 PIGCQ92535 297 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 ERGIC1Q969X5 290 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 Q96MT0 163 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 RDH12Q96NR8 316 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 BEX2Q9BXY8 128 aa7.76□□□□□ -1.17
SNHG1-215ENST00000540904 MOB1AQ9H8S9 216 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms