RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 ZNF806P0C7X5 589 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 PRF1P14222 555 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CRYGSP22914 178 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CD96P40200 585 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 NAA40Q86UY6 237 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 ANGPTL5Q86XS5 388 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CCDC54Q8NEL0 328 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 OR10D3Q8NH80 312 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
RTN3-210ENST00000540798 FAM71F1Q96KD3 344 aaPredicted RBP12.09□□□□□ -0.47
RTN3-210ENST00000540798 SFXN2Q96NB2 322 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 EDEM2Q9BV94 578 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
RTN3-210ENST00000540798 ZNF224Q9NZL3 707 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CST2P09228 141 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 DHODHQ02127 395 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CPT1CQ8TCG5 803 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 PGAM5Q96HS1 289 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CDC6Q99741 560 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CA10Q9NS85 328 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 LRFN1Q9P244 771 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 PCDHGA1Q9Y5H4 931 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CXCL13O43927 109 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 CYTIPO60759 359 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 APOC1P02654 83 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
RTN3-210ENST00000540798 THBS4P35443 961 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 ALDH3B1P43353 468 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 TMEM164Q5U3C3 297 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 AWAT2Q6E213 333 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 C10orf35Q96D05 121 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 FAM173AQ9BQD7 235 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 LPAR5Q9H1C0 372 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 SLC2A8Q9NY64 477 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 ZNF69Q9UC07 566 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 ANAPC10Q9UM13 185 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 BOKQ9UMX3 212 aaPredicted RBP12.09□□□□□ -0.47
RTN3-210ENST00000540798 R4GN57 208 aa12.09□□□□□ -0.47
RTN3-210ENST00000540798 RAB3DO95716 219 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 HPNP05981 417 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 ECH1Q13011 328 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 SPINK14Q6IE38 97 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 OR2M7Q8NG81 312 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 OR8S1Q8NH09 359 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 RADILQ96JH8 1075 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 GAL3ST1Q99999 423 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 MRPS28Q9Y2Q9 187 aaKnown RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 A0A0A6YYD4 124 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 SYNGR3O43761 229 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 DHRS3O75911 302 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 POU3F2P20265 443 aaPredicted RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 GDF1P27539 372 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 OR3A4PP47883 348 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 STARP49675 285 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 RAB35Q15286 201 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 RIPPLY2Q5TAB7 128 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 ZNF767PQ75MW2 155 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 FJX1Q86VR8 437 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 TMEM45BQ96B21 275 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 SLC25A21Q9BQT8 299 aaPredicted RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 ZMAT3Q9HA38 289 aaKnown RBP12.08□□□□□ -0.48
RTN3-210ENST00000540798 MGAT4CQ9UBM8 478 aa12.08□□□□□ -0.48
RTN3-210ENST00000540798 CYB5AP00167 134 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 TPOP07202 933 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 DNASE1P24855 282 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 CDNFQ49AH0 187 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 GLIPR1L1Q6UWM5 242 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 MEIOBQ8N635 442 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 OR52B4Q8NGK2 314 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 ROBO4Q8WZ75 1007 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 CPNE4Q96A23 557 aaPredicted RBP12.07□□□□□ -0.48
RTN3-210ENST00000540798 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 SIGLEC12Q96PQ1 595 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 HEXA-AS1Q9H8Q6 139 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 LEUTXA8MZ59 168 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 ZNF736B4DX44 427 aaPredicted RBP12.07□□□□□ -0.48
RTN3-210ENST00000540798 M0R135 149 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 SHOXO15266 292 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 CDC14BO60729 498 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 CHRM2P08172 466 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 UBBP0CG47 229 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 HAAOP46952 286 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 OC90Q02509 493 aaPredicted RBP12.07□□□□□ -0.48
RTN3-210ENST00000540798 LGALSLQ3ZCW2 172 aaPredicted RBP12.07□□□□□ -0.48
RTN3-210ENST00000540798 DCAF10Q5QP82 559 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 FREM2Q5SZK8 3169 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 ZNF799Q96GE5 643 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 SLC23A1Q9UHI7 598 aa12.07□□□□□ -0.48
RTN3-210ENST00000540798 OR14I1A6ND48 311 aa12.06□□□□□ -0.48
RTN3-210ENST00000540798 F5H5K5 113 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms