RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	DPY19L2P2	Q6ZN68	376 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DNM1P46	Q6ZS02	220 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LANCL3	Q6ZV70	420 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FAM122B	Q7Z309	247 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RTN4RL2	Q86UN3	420 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	JAGN1	Q8N5M9	183 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CHST4	Q8NCG5	386 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ADAD2	Q8NCV1	583 aa	Known RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR51A2	Q8NGJ7	313 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FLVCR1-AS1	Q8TAF5	88 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF417	Q8TAU3	575 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GPR148	Q8TDV2	347 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GPX8	Q8TED1	209 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C15orf40	Q8WUR7	153 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DDIT4L	Q96D03	193 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NUDT9	Q9BW91	350 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	POTEKP	Q9BYX7	375 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	COMMD4	Q9H0A8	199 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	UPB1	Q9UBR1	384 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KCNG2	Q9UJ96	466 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DTX4	Q9Y2E6	619 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CSAG2	Q9Y5P2	127 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CEP250	Q9BV73	2442 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TRBV5-5	A0A0J9YX44	114 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PQLC2L	A1A4F0	135 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CBR3	O75828	277 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	UTS2	O95399	124 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DAO	P14920	347 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KIR3DL2	P43630	455 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MLF1	P58340	268 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TAS2R19	P59542	299 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IL13RA1	P78552	427 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RIPPLY1	Q0D2K3	151 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HABP2	Q14520	560 aa	Predicted RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SMCO1	Q147U7	214 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PEA15	Q15121	130 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ULK3	Q6PHR2	472 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CORO6	Q6QEF8	472 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TIPARP	Q7Z3E1	657 aa	Known RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NAA40	Q86UY6	237 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FOXRED2	Q8IWF2	684 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	OR4C3	Q8NH37	302 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C16orf52	Q8NHV5	167 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	FAM46B	Q96A09	425 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C14orf79	Q96F83	325 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LMF2	Q9BU23	707 aa	Known RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SYT4	Q9H2B2	425 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ELOVL3	Q9HB03	270 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF71	Q9NQZ8	489 aa	Predicted RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	UQCC1	Q9NVA1	299 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CHD7	Q9P2D1	2997 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LOC102723996	A0A087X1L8	192 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LOC100289279	A0A1B0GTE1	492 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783		A0A1B0GTI1	187 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF726	A6NNF4	738 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF264	O43296	627 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	DKK1	O94907	266 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SNAPIN	O95295	136 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ABHD16A	O95870	558 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CD8A	P01732	235 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	S100A9	P06702	114 aa	Known RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	S100A6	P06703	90 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MUC1	P15941	1255 aa	Predicted RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PI3	P19957	117 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ADH6	P28332	368 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MAP3K8	P41279	467 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	GABRA4	P48169	554 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ADAM8	P78325	824 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MICB	Q29980	383 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ASPHD2	Q6ICH7	369 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SLC16A9	Q7RTY1	509 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PRR22	Q8IZ63	422 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ARMC10	Q8N2F6	343 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ARL11	Q969Q4	196 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ISOC2	Q96AB3	205 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RRNAD1	Q96FB5	475 aa	Known RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CLCC1	Q96S66	551 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	KLHDC3	Q9BQ90	382 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NMNAT2	Q9BZQ4	307 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C1orf198	Q9H425	327 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	NGB	Q9NPG2	151 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RPH3A	Q9Y2J0	694 aa	Predicted RBP	5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	POLR1D	Q9Y2S0	133 aa		5.04	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	LRRK1	Q38SD2	2015 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MED19	A0JLT2	244 aa	Predicted RBP	5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	RAB19	A4D1S5	217 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	MSGN1	A6NI15	193 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	C11orf98	E9PRG8	122 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	TIAF1	O95411	115 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	IL33	O95760	270 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PNP	P00491	289 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	CD1A	P06126	327 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ERCC1	P07992	297 aa	Predicted RBP	5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	ZNF735	P0CB33	412 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	HOXB1	P14653	301 aa	Predicted RBP	5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SDHA	P31040	664 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	SERPINF1	P36955	418 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	S100A12	P80511	92 aa		5.03	□□□□□ -1.6
RAPGEF4-215	ENST00000540783	PSG6	Q00889	435 aa		5.03	□□□□□ -1.6

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