RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 KCNK17Q96T54 332 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 SLC25A21Q9BQT8 299 aaPredicted RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 NAA11Q9BSU3 229 aaPredicted RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 PHF7Q9BWX1 381 aaPredicted RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 RPH3AQ9Y2J0 694 aaPredicted RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 KCNK7Q9Y2U2 307 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 R4GMQ9 66 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 LDLRAD4O15165 306 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 CD8AP01732 235 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 FAM69BQ5VUD6 431 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 KCTD18Q6PI47 426 aaPredicted RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 PPP1R3BQ86XI6 285 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 PNLDC1Q8NA58 520 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 OR5T2Q8NGG2 359 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 METTL8Q9H825 291 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 CEP192Q8TEP8 1941 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 H3BML4 177 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 KNG1P01042 644 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 SNRNP70P08621 437 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 F2RL1P55085 397 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 POU3F1Q03052 451 aaPredicted RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 SGCAQ16586 387 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 PCK2Q16822 640 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 AVPI1Q5T686 147 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 RPL7L1Q6DKI1 246 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 ANKRD37Q7Z713 158 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 ARL11Q969Q4 196 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 UQCC2Q9BRT2 126 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 ST6GALNAC5Q9BVH7 336 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 RHOFQ9HBH0 211 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 TTLL8A6PVC2 850 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 EFSO43281 561 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 MED6O75586 246 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 FOSL2P15408 326 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 OR2B8PP59922 312 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 FOXF1Q12946 379 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 PEA15Q15121 130 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 RPS10P5Q9NQ39 176 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 GDF2Q9UK05 429 aaPredicted RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 URB1O60287 2271 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 SFTA3P0C7M3 94 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 FSTP19883 344 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 CRABP1P29762 137 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 LPAR6P43657 344 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 DRAM2Q6UX65 266 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 ADGRE4PQ86SQ3 457 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 OR10S1Q8NGN2 331 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 WDR77Q9BQA1 342 aaPredicted RBP11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 ZFP57Q9NU63 452 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 EXPH5Q8NEV8 1989 aa11.13□□□□□ -0.63
SFSWAP-208ENST00000539506 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 CRHP06850 196 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 CPT2P23786 658 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 HSF1Q00613 529 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 UNC119Q13432 240 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 RAB32Q13637 225 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 H1FNTQ75WM6 255 aaPredicted RBP11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 NAA40Q86UY6 237 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 SLC25A42Q86VD7 318 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 PAQR4Q8N4S7 273 aaPredicted RBP11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 NAXEQ8NCW5 288 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 SECTM1Q8WVN6 248 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 TMEM41AQ96HV5 264 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 SLC17A5Q9NRA2 495 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 B3GAT1Q9P2W7 334 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 RAB27BO00194 218 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 MPIG6BO95866 241 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ARG1P05089 322 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 S100A6P06703 90 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ABOP16442 354 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 GLRA1P23415 457 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ZP4Q12836 540 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 OR2A2Q6IF42 318 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ALKBH2Q6NS38 261 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 RHBDD2Q6NTF9 364 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 WDR74Q6RFH5 385 aaPredicted RBP11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 TDHQ8IZJ6 230 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 CARFQ8N187 725 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 OR1M1Q8NGA1 313 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 TGIF2Q9GZN2 237 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 HHLA2Q9UM44 414 aa11.12□□□□□ -0.63
SFSWAP-208ENST00000539506 ARPC4-TTLL3A0A0A6YYG9 625 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 SOCS1O15524 211 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 SCGB1D2O95969 90 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 APOC1P02654 83 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 ISG15P05161 165 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 SMCO1Q147U7 214 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 MST1LQ2TV78 715 aa11.11□□□□□ -0.63
SFSWAP-208ENST00000539506 MFSD8Q8NHS3 518 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms