RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CMC2Q9NRP2 79 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 TMEM38BQ9NVV0 291 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CNOT2Q9NZN8 540 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 DNAJB11Q9UBS4 358 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 ZNF346Q9UL40 294 aaKnown RBP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.75□□□□□ -1.81
SNHG1-208ENST00000538266 GPR52Q9Y2T5 361 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 AMDHD2Q9Y303 409 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 NBEAQ8NFP9 2946 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 CHD6Q8TD26 2715 aa3.75□□□□□ -1.81
SNHG1-208ENST00000538266 OR6C68A6NDL8 312 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CCDC182A6NF36 153 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 HMX3A6NHT5 357 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 FAM183AA6NL82 134 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 C12orf71A8MTZ7 269 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PRR23D1E9PI22 279 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CCRL2O00421 344 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SURF4O15260 269 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 UBL3O95164 117 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 RAB36O95755 333 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CLDN1O95832 211 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PTHP01270 115 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PRR23D2P0DMB1 279 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CD79AP11912 226 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CTLA4P16410 223 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 NPR2P20594 1047 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 MSR1P21757 451 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 LAP3P28838 519 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 EPHA2P29317 976 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CDKN2AP42771 156 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 BLVRAP53004 296 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SLC25A1P53007 311 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 NUDT6P53370 316 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 ARPC4P59998 168 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PCBD1P61457 104 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 MRPS34P82930 218 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CDK5Q00535 292 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 HSF2Q03933 536 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SRSF1Q07955 248 aaKnown RBP eCLIP3.74□□□□□ -1.815e-12■■□□□ 12.5
SNHG1-208ENST00000538266 ST3GAL4Q11206 333 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 ASAH1Q13510 395 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 GPR50Q13585 617 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SNTB1Q13884 538 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CDK10Q15131 360 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PPA1Q15181 289 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TSC22D1Q15714 1073 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 GABRA6Q16445 453 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CARTPTQ16568 116 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SGCAQ16586 387 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 HIST3H3Q16695 136 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TSTQ16762 297 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 GSG1Q2KHT4 349 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TBRG1Q3YBR2 411 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 HIKESHIQ53FT3 197 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 KLHL12Q53G59 568 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TIMM23BQ5SRD1 257 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PHYHD1Q5SRE7 291 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 C10orf128Q5T292 105 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 LCN1P1Q5VSP4 162 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 MEDAGQ5VYS4 303 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PLBD1Q6P4A8 553 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CLEC9AQ6UXN8 241 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 NHLRC1Q6VVB1 395 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TMPRSS11AQ6ZMR5 421 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PTCHD4Q6ZW05 846 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 GDPD3Q7L5L3 318 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 LINGO2Q7L985 606 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 GID4Q8IVV7 300 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR8H2Q8N162 312 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 LRRC18Q8N456 261 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SLC22A24Q8N4F4 322 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SLC37A3Q8NCC5 494 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 NPEPL1Q8NDH3 523 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR9Q1Q8NGQ5 310 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR1K1Q8NGR3 316 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR6F1Q8NGZ6 308 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR4Q3Q8NH05 313 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR52N5Q8NH56 324 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 FAM222BQ8WU58 562 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 HSD17B8Q92506 261 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 Q96MT0 163 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 WFIKKN1Q96NZ8 548 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 WDFY2Q96P53 400 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 IL4I1Q96RQ9 567 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 PRR25Q96S07 402 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 KCNS3Q9BQ31 491 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CDCA4Q9BXL8 241 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SLC22A4Q9H015 551 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR51E2Q9H255 320 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 OR51V1Q9H2C8 321 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 FN3KQ9H479 309 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 SLA2Q9H6Q3 261 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
SNHG1-208ENST00000538266 RNF121Q9H920 327 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 CLN6Q9NWW5 311 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 TVP23BQ9NYZ1 205 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 MGAT4CQ9UBM8 478 aa3.74□□□□□ -1.81
SNHG1-208ENST00000538266 AASSQ9UDR5 926 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms