RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 IKZF5Q9H5V7 419 aa10.09□□□□□ -0.79
LINC00346-201ENST00000538077 PLEKHB1Q9UF11 243 aaPredicted RBP10.09□□□□□ -0.79
LINC00346-201ENST00000538077 GPR31O00270 319 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 COX7A2P2O60397 106 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ONECUT2O95948 504 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 HLA-HP01893 362 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 PCK2Q16822 640 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 FAM122CQ6P4D5 195 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 C17orf107Q6ZR85 190 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 C17orf78Q8N4C9 275 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ERGIC1Q969X5 290 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 PSD2Q9BQI7 771 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 TAAR3PQ9P1P4 343 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
LINC00346-201ENST00000538077 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SEC14L6B5MCN3 397 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 C3orf80F5H4A9 247 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 OR3A4PP47883 348 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 EGR3Q06889 387 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 KCNRGQ8N5I3 272 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 WDR31Q8NA23 367 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 NPEPL1Q8NDH3 523 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ISL2Q96A47 359 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM231Q9H6L2 316 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 NPTNQ9Y639 398 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF701M0R085 212 aaPredicted RBP10.08□□□□□ -0.8
LINC00346-201ENST00000538077 PATE4P0C8F1 98 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SLC17A1Q14916 467 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 CLEC12BQ2HXU8 276 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 PWWP2BQ6NUJ5 590 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 CMTM4Q8IZR5 234 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SVBPQ8N300 66 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 TAAR6Q96RI8 345 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SMIM21Q3B7S5 101 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 DRAM2Q6UX65 266 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
LINC00346-201ENST00000538077 MOB1AQ9H8S9 216 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 DOCK1Q14185 1865 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 ATXN7O15265 892 aaPredicted RBP10.08□□□□□ -0.8
LINC00346-201ENST00000538077 GALNT16Q8N428 558 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SLC35B4Q969S0 331 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 GALMQ96C23 342 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 SIGLEC11Q96RL6 698 aa10.08□□□□□ -0.8
LINC00346-201ENST00000538077 LRP3O75074 770 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 FGF7P21781 194 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 GUCA2AQ02747 115 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 SYT6Q5T7P8 510 aaPredicted RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 CADM4Q8NFZ8 388 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 RNF141Q8WVD5 230 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ZNRF4Q8WWF5 429 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 SLC25A46Q96AG3 418 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 SLC26A1Q9H2B4 701 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 AUNIPQ9H7T9 357 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 A0A087WUJ7 227 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 M0QZ24 198 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 CDX4O14627 284 aaPredicted RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 CHEK1O14757 476 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 GALNSP34059 522 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 FAM53BQ14153 422 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 DHHO43323 396 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 PIGPP57054 158 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ADPRHL1Q8NDY3 354 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF251Q9BRH9 671 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 RCL1Q9Y2P8 373 aaKnown RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 MN1Q10571 1320 aaPredicted RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 TRAV17A0A0B4J275 112 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF724A8MTY0 619 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 K7EQS6 105 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OPN1MWP04001 364 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OPN1MW2P0DN77 364 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OPN1MW3P0DN78 364 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 SSPNQ14714 243 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 RTP5Q14D33 572 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF628Q5EBL2 1059 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OR52H1Q8NGJ2 320 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OR52B4Q8NGK2 314 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OR4C3Q8NH37 302 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 OR1F12Q8NHA8 337 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 LILRA5A6NI73 299 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 SNTB1Q13884 538 aaKnown RBP10.07□□□□□ -0.8
LINC00346-201ENST00000538077 HFEQ30201 348 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 TMEM41BQ5BJD5 291 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 TOR2AQ5JU69 321 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 ZNF774Q6NX45 483 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 STAC2Q6ZMT1 411 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 MARCH1Q8TCQ1 289 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 MVB12AQ96EY5 273 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 B9D1Q9UPM9 204 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 LRP12Q9Y561 859 aa10.07□□□□□ -0.8
LINC00346-201ENST00000538077 UBE2L5PA0A1B0GUS4 154 aa10.06□□□□□ -0.8
LINC00346-201ENST00000538077 FAM157AC9JC47 383 aa10.06□□□□□ -0.8
LINC00346-201ENST00000538077 TMIGD3P0DMS9 266 aaPredicted RBP10.06□□□□□ -0.8
LINC00346-201ENST00000538077 ATF1P18846 271 aa10.06□□□□□ -0.8
LINC00346-201ENST00000538077 PMP22Q01453 160 aa10.06□□□□□ -0.8
LINC00346-201ENST00000538077 ADGRG3Q86Y34 549 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms