RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 DANCRP0C864 163 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 RPS4Y1P22090 263 aaKnown RBP10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNHIT3Q15649 155 aaPredicted RBP10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 ISXQ2M1V0 245 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 ELOA3BQ3SY89 546 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 TMEM128Q5BJH2 165 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF542PQ5EBM4 170 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 KIAA0895LQ68EN5 471 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 MFSD12Q6NUT3 480 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 RPUSD3Q6P087 351 aaKnown RBP10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 OPN5Q6U736 354 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 ELOA3Q8NG57 546 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 SCARF2Q96GP6 870 aaPredicted RBP10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 SHDQ96IW2 340 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 C2orf50Q96LR7 162 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 OR2M4Q96R27 311 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 SDF2Q99470 211 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 PARP12Q9H0J9 701 aaKnown RBP10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 SLC26A1Q9H2B4 701 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 NELFAQ9H3P2 528 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 SMDT1Q9H4I9 107 aa10.13□□□□□ -0.79
SEMA4D-221ENST00000537934 PRR19A6NJB7 356 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 CYB5BO43169 146 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 RAMP1O60894 148 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 CLEC3AO75596 197 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 METTL15P1P0C7V9 234 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 NID1P14543 1247 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 MSX1P28360 303 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 TSFMP43897 325 aaKnown RBP10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 TDGF1P3P51864 188 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 RPP30P78346 268 aaKnown RBP10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF616Q08AN1 781 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 IL15RAQ13261 267 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 CEBPEQ15744 281 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 SLC48A1Q6P1K1 146 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF343Q6P1L6 599 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 SUMF2Q8NBJ7 301 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZPLD1Q8TCW7 415 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ABHD5Q8WTS1 349 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 SLC22A18Q96BI1 424 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ALG12Q9BV10 488 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ULBP3Q9BZM4 244 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 AICDAQ9GZX7 198 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 LUZP4Q9P127 313 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 KLHDC2Q9Y2U9 406 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 FBXO7Q9Y3I1 522 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ENTPD2Q9Y5L3 495 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZDBF2Q9HCK1 2354 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 TDRD6O60522 2096 aaKnown RBP10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 TGIF2-C20orf24A0A0A6YYL0 155 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 SFT2D2O95562 160 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 IL18BPO95998 194 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 LMO1P25800 156 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 GNG10P50151 68 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ERVFRD-1P60508 538 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 RASGEF1BQ0VAM2 473 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 DCAF10Q5QP82 559 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 LEG1Q6P5S2 330 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 DPY19L2P2Q6ZN68 376 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 FJX1Q86VR8 437 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 KDM8Q8N371 416 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 POC1AQ8NBT0 407 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 RCBTB1Q8NDN9 531 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 OR14K1Q8NGZ2 314 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 GRHL3Q8TE85 626 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 AQP3Q92482 292 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF681Q96N22 645 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF587Q96SQ5 575 aaPredicted RBP10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 MENTQ9BUN1 341 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 TBC1D29Q9UFV1 150 aa10.12□□□□□ -0.79
SEMA4D-221ENST00000537934 A0A0B4J2E0 115 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 A0A1B0GX12 115 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 FITM1A5D6W6 292 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 H3BSH0 61 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 NUDT21O43809 227 aaKnown RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 NGFRP08138 427 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TAGLN2P37802 199 aaKnown RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 CLN3Q13286 438 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TMEM35AQ53FP2 167 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TRAPPC6BQ86SZ2 158 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 HOGA1Q86XE5 327 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF101Q8IZC7 436 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 ZNF619Q8N2I2 560 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 SNIP1Q8TAD8 396 aaKnown RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TSEN15Q8WW01 171 aaKnown RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 FRZBQ92765 325 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 OR10C1Q96KK4 312 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 JSRP1Q96MG2 331 aaPredicted RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TCEAL2Q9H3H9 227 aaPredicted RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 FANCMQ8IYD8 2048 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 FAM171A2A8MVW0 826 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 PEX12O00623 359 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 TGOLN2O43493 480 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 IFNA6P05013 189 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 SEC11BP0C7V7 166 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 PSMB5P28074 263 aa10.11□□□□□ -0.79
SEMA4D-221ENST00000537934 RPL12P30050 165 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms