RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SERPINE3A8MV23 424 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 HNRNPCL2B2RXH8 293 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 HNRNPCL3B7ZW38 293 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 HNRNPCL1O60812 293 aaKnown RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 LYPD3O95274 346 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 CHEK2O96017 543 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 CHRNGP07510 517 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 HNRNPCL4P0DMR1 293 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 IGHV1-8P0DP01 117 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 MYL2P10916 166 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 UMPSP11172 480 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 CDC25BP30305 580 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 SERPINB9P50453 376 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 DAP3P51398 398 aaKnown RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 DLX6P56179 175 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 MXRA7P84157 204 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 TRAP1Q12931 704 aaKnown RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 DYNC1I2Q13409 638 aaKnown RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 TOP3AQ13472 1001 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 LINC00322Q6ZN03 302 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 DPP10Q8N608 796 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 OR11H6Q8NGC7 330 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 OR4M1Q8NGD0 313 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 AGR3Q8TD06 166 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 C4orf3Q8WVX3 66 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 MED30Q96HR3 178 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 RAB3IPQ96QF0 476 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 ERP44Q9BS26 406 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 TMED9Q9BVK6 235 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 EVA1AQ9H8M9 152 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 NINJ2Q9NZG7 142 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 CALML5Q9NZT1 146 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 GLS2Q9UI32 602 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 SIRT4Q9Y6E7 314 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-217ENST00000537162 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
CPSF7-217ENST00000537162 HMCN2Q8NDA2 5059 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 H7C1C5 153 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 OVOL1O14753 267 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 PSPNO60542 156 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 HIST1H2ABP04908 130 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 IGF1P05019 195 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 CTLA4P16410 223 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 DNAJB13P59910 316 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 LCN6P62502 163 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 GABPB1Q06547 395 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-217ENST00000537162 GPR139Q6DWJ6 353 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 SLC2A7Q6PXP3 512 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 CFAP77Q6ZQR2 320 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 ZNF621Q6ZSS3 439 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 PGAP1Q75T13 922 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 HIST3H2AQ7L7L0 130 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 CATSPERDQ86XM0 798 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 C10orf107Q8IVU9 208 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 SLC35F6Q8N357 371 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 STPG2Q8N412 459 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 COMMD1Q8N668 190 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 TMEM185AQ8NFB2 350 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 OR6Q1Q8NGQ2 317 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-217ENST00000537162 HIST1H2ACQ93077 130 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 DNTTIP1Q9H147 329 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 TMEM27Q9HBJ8 222 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 TBC1D23Q9NUY8 699 aa7.29□□□□□ -1.24
CPSF7-217ENST00000537162 KLK5Q9Y337 293 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-217ENST00000537162 IGKV1D-17A0A075B6S4 117 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 GUCA1AP43080 201 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-217ENST00000537162 GABRA2P47869 451 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 DSTNP60981 165 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 SLC35B1P78383 322 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 AQP6Q13520 282 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 LAPTM4AQ15012 233 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 ANXA8L1Q5VT79 327 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 TEX38Q6PEX7 206 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 DPY19L4Q7Z388 723 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 HDDC2Q7Z4H3 204 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 TSPYL5Q86VY4 417 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-217ENST00000537162 GLB1L2Q8IW92 636 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 LNX2Q8N448 690 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 SPC24Q8NBT2 197 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 OR1M1Q8NGA1 313 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 OR1N2Q8NGR9 330 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 NDNFQ8TB73 568 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 MAL2Q969L2 176 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 EME1Q96AY2 570 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 RBP7Q96R05 134 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 SLC22A4Q9H015 551 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 TUBA4BQ9H853 241 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 MEPEQ9NQ76 525 aaPredicted RBP7.28□□□□□ -1.24
CPSF7-217ENST00000537162 NDE1Q9NXR1 346 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 SIGLEC8Q9NYZ4 499 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 USE1Q9NZ43 259 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.28□□□□□ -1.24
CPSF7-217ENST00000537162 CEPT1Q9Y6K0 416 aa7.28□□□□□ -1.24
CPSF7-217ENST00000537162 GMNCA6NCL1 334 aa7.27□□□□□ -1.25
CPSF7-217ENST00000537162 C17orf98A8MV24 154 aa7.27□□□□□ -1.25
CPSF7-217ENST00000537162 CDIPTO14735 213 aa7.27□□□□□ -1.25
CPSF7-217ENST00000537162 XRCC3O43542 346 aa7.27□□□□□ -1.25
CPSF7-217ENST00000537162 ALDOCP09972 364 aaKnown RBP7.27□□□□□ -1.25
CPSF7-217ENST00000537162 ACSM4P0C7M7 580 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms