RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CYC1P08574 325 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 PSMB6P28072 239 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 CX3CR1P49238 355 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM50BP56557 158 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 SLC35A1P78382 337 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 CYCSP99999 105 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 GUSBP11Q6P575 273 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 KCTD9Q7L273 389 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 PPP1R3BQ86XI6 285 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 OR4K17Q8NGC6 315 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 MARCH1Q8TCQ1 289 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 CASTOR1Q8WTX7 329 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM59Q9BXS4 323 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 GAREM1Q9H706 876 aa14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 BARX1Q9HBU1 254 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-202ENST00000535997 SULT2B1O00204 365 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 TP53I11O14683 189 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 TSPAN4O14817 238 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 SOCS1O15524 211 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 HCKP08631 526 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 NR2C1P13056 603 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 CNR1P21554 472 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 SFTPDP35247 375 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 CXCL12P48061 93 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 LSM6P62312 80 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 CCL7P80098 99 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 MICBQ29980 383 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 ZNF283Q8N7M2 679 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 OR2I1PQ8NGU4 316 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 SSC4DQ8WTU2 575 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 MRPS24Q96EL2 167 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 FAM71F1Q96KD3 344 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 URM1Q9BTM9 101 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 GUCA1AP43080 201 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 CBX5P45973 191 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 OR3A4PP47883 348 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 EIF3IQ13347 325 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 TMPPEQ6ZT21 453 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 FAM57BQ71RH2 274 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 TMEM185AQ8NFB2 350 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 SCGB3A2Q96PL1 93 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 GPER1Q99527 375 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 NMES1Q9C002 83 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 GHRLQ9UBU3 117 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 GPR132Q9UNW8 380 aa14.15□□□□□ -0.14
CHMP1A-202ENST00000535997 RAMP1O60894 148 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 CRHP06850 196 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 ECH1Q13011 328 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 BEX5Q5H9J7 111 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 LCN10Q6JVE6 187 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 MRPL14Q6P1L8 145 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 FAM89BQ8N5H3 189 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 TAS2R3Q9NYW6 316 aa14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 CHCHD2Q9Y6H1 151 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 NCOA6Q14686 2063 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-202ENST00000535997 C5orf51A6NDU8 294 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 EEF1E1-BLOC1S5C9J1V9 151 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 K7ESF4 209 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 EPHA8P29322 1005 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 H3F3AP84243 136 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 SNTB1Q13884 538 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ATXN7L3Q14CW9 347 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 FAM74A1Q5RGS3 127 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 RTN4RL2Q86UN3 420 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ZBTB44Q8NCP5 570 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 OR14K1Q8NGZ2 314 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 CLDN23Q96B33 292 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ZNF75AQ96N20 296 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 BANF2Q9H503 90 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 CHMP1AQ9HD42 196 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 A0A087WZY1 265 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 TRBV6-7A0A0A0MS04 114 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 IGKV1-9A0A0C4DH69 117 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 LY6G6EA0A0G2JKS1 128 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 F5H0A9 414 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 CRTAPO75718 401 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ALDH3B1P43353 468 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 TMEM17Q86X19 198 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 PNLDC1Q8NA58 520 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 CCDC74BQ96LY2 380 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 CDC6Q99741 560 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ARPC5LQ9BPX5 153 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 ZNF416Q9BWM5 594 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 MBD2Q9UBB5 411 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 U3KQA8 63 aa14.13□□□□□ -0.15
CHMP1A-202ENST00000535997 C13orf42A0A1B0GVH6 325 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 MFNGO00587 321 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 GP1BAP07359 652 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 PRF1P14222 555 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 ATF4P18848 351 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 CLDN17P56750 224 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 GTPBP8Q8N3Z3 284 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 GJC3Q8NFK1 279 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 ARHGAP5-AS1Q96IT6 56 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 OR10A2Q9H208 303 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 C5orf66Q9H5L9 145 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 MED12Q93074 2177 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 A0A0B4J2A0 478 aa14.12□□□□□ -0.15
CHMP1A-202ENST00000535997 SIGLEC6O43699 453 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms