RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 TMEM230Q96A57 120 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 RPUSD4Q96CM3 377 aaKnown RBP2.11□□□□□ -2.07
VBP1-203ENST00000535916 RCN3Q96D15 328 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 RNF145Q96MT1 663 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 ZFP3Q96NJ6 502 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 SCGB3A2Q96PL1 93 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 GABRG3Q99928 467 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 UQCC2Q9BRT2 126 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 OR11A1Q9GZK7 315 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 POLR2J2Q9GZM3 115 aaKnown RBP2.11□□□□□ -2.07
VBP1-203ENST00000535916 POLR2J3Q9H1A7 115 aaKnown RBP2.11□□□□□ -2.07
VBP1-203ENST00000535916 CCL28Q9NRJ3 127 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 VAPAQ9P0L0 249 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 WIF1Q9Y5W5 379 aa2.11□□□□□ -2.07
VBP1-203ENST00000535916 F11RQ9Y624 299 aaKnown RBP2.11□□□□□ -2.07
VBP1-203ENST00000535916 POLR3AO14802 1390 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 NUP153P49790 1475 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 A0A0G2JN53 185 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 A0A1B0GTI1 187 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 SMLR1H3BR10 107 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 M0QXV9 152 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 GABRPO00591 440 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 FAM189A1O60320 539 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CSF3P09919 207 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OR5H8P0DN80 308 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CALM1P0DP23 149 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CALM2P0DP24 149 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CALM3P0DP25 149 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 ZNF14P17017 642 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 TCP1P17987 556 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 PGAM1P18669 254 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 GGT1P19440 569 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CD40LGP29965 261 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 ARR3P36575 388 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 AP1S2P56377 157 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OR2B8PP59922 312 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 UBE2G2P60604 165 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 ST3GAL4Q11206 333 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 PIGHQ14442 188 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 PON3Q15166 354 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 NSDHLQ15738 373 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 SGCAQ16586 387 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 EPGNQ6UW88 154 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 ABHD13Q7L211 337 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CDKL3Q8IVW4 592 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 NELFCDQ8IXH7 590 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 CA13Q8N1Q1 262 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 C11orf72Q8NBR9 251 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OR10G9Q8NGN4 311 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OR6Q1Q8NGQ2 317 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 APH1BQ8WW43 257 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 SGTBQ96EQ0 304 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 AURKBQ96GD4 344 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 TSNAXQ99598 290 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 CIB1Q99828 191 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 MICU1Q9BPX6 476 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 ZNF251Q9BRH9 671 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 MED10Q9BTT4 135 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OSBPL11Q9BXB4 747 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 SLC25A22Q9H936 323 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 PLEKHA1Q9HB21 404 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 SIRT7Q9NRC8 400 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 IMP3Q9NV31 184 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 RBAKQ9NYW8 714 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 CES1P1Q9UKY3 287 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 KLF12Q9Y4X4 402 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 OR51B2Q9Y5P1 312 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 MRPS18BQ9Y676 258 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 RAD50Q92878 1312 aa2.1□□□□□ -2.07
VBP1-203ENST00000535916 FBN1P35555 2871 aaKnown RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 BRD4O60885 1362 aaPredicted RBP2.1□□□□□ -2.07
VBP1-203ENST00000535916 TRAV8-7A0A075B6U6 113 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 C1orf232A0A0U1RR37 186 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 SEC14L6B5MCN3 397 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 H3BNH8 94 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 H7C1H1 209 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 H7C2Y5 167 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 DFFAO00273 331 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 PLPP3O14495 311 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 SLC16A7O60669 478 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 SLC25A27O95847 323 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 RETP07949 1114 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 GNAO1P09471 354 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 SMIM10L1P0DMW3 83 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 LIPCP11150 499 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 ICAM2P13598 275 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 ADRB3P13945 408 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 F2RP25116 425 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 MYCNOSP40205 109 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 EMP2P54851 167 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 MYL6P60660 151 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 VSNL1P62760 191 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 PRR3P79522 188 aaKnown RBP2.09□□□□□ -2.07
VBP1-203ENST00000535916 REG3AQ06141 175 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 TPBGQ13641 420 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 OR4D1Q15615 310 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 CHRFAM7AQ494W8 412 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 FAM27D1Q5T7N8 215 aa2.09□□□□□ -2.07
VBP1-203ENST00000535916 SETD3Q86TU7 594 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms