RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GYPAP02724 150 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 H2BFMP0C1H6 154 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 MDKP21741 143 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 OMGP23515 440 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 MSX2P35548 267 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 HNRNPA0Q13151 305 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 GK3PQ14409 553 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 LYPD2Q6UXB3 125 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 CYP2R1Q6VVX0 501 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 Q6YL49 198 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 GDPGP1Q6ZNW5 385 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 NAA40Q86UY6 237 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 DHFR2Q86XF0 187 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 SLC37A3Q8NCC5 494 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 OR9Q1Q8NGQ5 310 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 OR6N2Q8NGY6 317 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 LRRC29Q8WV35 223 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 LHX4Q969G2 390 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 REEP6Q96HR9 211 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 INTS14Q96SY0 518 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 RTL8AQ9BWD3 113 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 CNTD2Q9H8S5 307 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 ZNF556Q9HAH1 456 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 MRPL22Q9NWU5 206 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 IL20Q9NYY1 176 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 ONECUT1Q9UBC0 465 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 ANK2Q01484 3957 aa11.02□□□□□ -0.65
CLSTN3-205ENST00000535452 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 A0A1B0GWJ7 208 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 CLPSL1A2RUU4 121 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 DVL1O14640 695 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 SEMG1P04279 462 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 SLC2A1P11166 492 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 PMELP40967 661 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 RPS27P42677 84 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 SLC25A1P53007 311 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 ARF6P62330 175 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 OLFML2AQ68BL7 652 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 BTN2A1Q7KYR7 527 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 ERI1Q8IV48 349 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 FAM81AQ8TBF8 368 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 NPRL2Q8WTW4 380 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 FUZQ9BT04 418 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 MAGIXQ9H6Y5 334 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 ZNF446Q9NWS9 450 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 LYVE1Q9Y5Y7 322 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 KPTNQ9Y664 436 aa11.01□□□□□ -0.65
CLSTN3-205ENST00000535452 IGHV1-69DA0A0B4J2H0 117 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 C22orf46C9J442 243 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 TNFRSF13BO14836 293 aaPredicted RBP11□□□□□ -0.65
CLSTN3-205ENST00000535452 IGHV1-69P01742 117 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 FBP1P09467 338 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 HOXB6P17509 224 aaKnown RBP11□□□□□ -0.65
CLSTN3-205ENST00000535452 SPI1P17947 270 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 POU1F1P28069 291 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 GSTT1P30711 240 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 HMGA2P52926 109 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 PAX2Q02962 417 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 CRMP1Q14194 572 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 MICAQ29983 383 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 CDONQ4KMG0 1287 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 TEX30Q5JUR7 227 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 DHRS7BQ6IAN0 325 aaPredicted RBP11□□□□□ -0.65
CLSTN3-205ENST00000535452 FAM57BQ71RH2 274 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 SLC16A9Q7RTY1 509 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 COMMD2Q86X83 199 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 TIGD4Q8IY51 512 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 KIR3DL3Q8N743 410 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 DTX3Q8N9I9 347 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
CLSTN3-205ENST00000535452 BRD7Q9NPI1 651 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 DNAJC27Q9NZQ0 273 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 ZNF391Q9UJN7 358 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 U3KQV3 271 aa11□□□□□ -0.65
CLSTN3-205ENST00000535452 A0A1W2PPH5 198 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 A0A1W2PQ09 198 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 ANKRD61A6NGH8 418 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 TMEM210A6NLX4 147 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 WIPF1O43516 503 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 E2F6O75461 281 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 NDUFA7O95182 113 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 SOX14O95416 240 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 GASTP01350 101 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 GYPBP06028 91 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 SFTPBP07988 381 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 MELTFP08582 738 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 OTX1P32242 354 aaPredicted RBP10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 RBMXP38159 391 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 RPS7P62081 194 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 GNGT1P63211 74 aa10.99□□□□□ -0.65
CLSTN3-205ENST00000535452 RSPO1Q2MKA7 263 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms