RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 NLRC3Q7RTR2 1065 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 NR2C2APQ86WQ0 139 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 OR4F15Q8NGB8 312 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 C15orf40Q8WUR7 153 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 PHYHIPQ92561 330 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 NSMAFQ92636 917 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 KISS1RQ969F8 398 aaPredicted RBP10.77□□□□□ -0.68
SCARB1-204ENST00000535005 ZNF837Q96EG3 531 aaPredicted RBP10.77□□□□□ -0.68
SCARB1-204ENST00000535005 BOD1Q96IK1 185 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 RBM24Q9BX46 236 aaKnown RBP10.77□□□□□ -0.68
SCARB1-204ENST00000535005 OPN3Q9H1Y3 402 aaPredicted RBP10.77□□□□□ -0.68
SCARB1-204ENST00000535005 COQ3Q9NZJ6 369 aa10.77□□□□□ -0.68
SCARB1-204ENST00000535005 PLSCR5A0PG75 271 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 SNRPGP15A8MWD9 76 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 HRGP04196 525 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 IL5P05113 134 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 CD1AP06126 327 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 COX5AP20674 150 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 BMP5P22003 454 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 MAPK3P27361 379 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 TSPAN5P62079 268 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 ACTC1P68032 377 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 ACTA1P68133 377 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 SNTB2Q13425 540 aaKnown RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 GGTLC2Q14390 218 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 RGS7BPQ6MZT1 257 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 ZNF474Q6S9Z5 364 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 RELL2Q8NC24 303 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 SLC26A10Q8NG04 563 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 OR51L1Q8NGJ5 315 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 SCARB1Q8WTV0 552 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 MRI1Q9BV20 369 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 ALG8Q9BVK2 526 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 C20orf85Q9H1P6 137 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 GPN1Q9HCN4 374 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 NPDC1Q9NQX5 325 aaPredicted RBP10.77□□□□□ -0.69
SCARB1-204ENST00000535005 PCNX1Q96RV3 2341 aa10.77□□□□□ -0.69
SCARB1-204ENST00000535005 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 G3V3Q6 166 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 SULT1B1O43704 296 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 ARL6IP5O75915 188 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 RGS11O94810 467 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 ITGA5P08648 1049 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 HOXB1P14653 301 aaPredicted RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 RAB3BP20337 219 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 AGAP20933 346 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 IGHV1-2P23083 117 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 MECP2P51608 486 aaKnown RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 CCR9P51686 369 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 FOXG1P55316 489 aaPredicted RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 ZP1P60852 638 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 ARF1P84077 181 aaKnown RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 DBPQ10586 325 aaPredicted RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 SLC25A35Q3KQZ1 300 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 SHFQ7M4L6 423 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 NABP1Q96AH0 204 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 FOXB1Q99853 325 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 TMEM38BQ9NVV0 291 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 RALYQ9UKM9 306 aaKnown RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 SLC5A6Q9Y289 635 aa10.76□□□□□ -0.69
SCARB1-204ENST00000535005 NCOA6Q14686 2063 aaPredicted RBP10.76□□□□□ -0.69
SCARB1-204ENST00000535005 HMSDA8MTL9 139 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 FAM171A2A8MVW0 826 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 L7N2F9 121 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 OR2A4O95047 310 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 CFDP00746 253 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 TFP02787 698 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 FGF2P09038 288 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 RAB3AP20336 220 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 PSMB1P20618 241 aaKnown RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 GUCA1AP43080 201 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 TGFBR3Q03167 851 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 POU4F2Q12837 409 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 PCK2Q16822 640 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 TEX30Q5JUR7 227 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 UBE2NLQ5JXB2 153 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 FAM27BQ5VT28 67 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 ZNF433Q8N7K0 673 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 C1orf162Q8NEQ5 155 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 OR6M1Q8NGM8 313 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 OR6K6Q8NGW6 343 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 ZMYND19Q96E35 227 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 OR2A7Q96R45 310 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 METTL17Q9H7H0 456 aaPredicted RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 MRPL22Q9NWU5 206 aaKnown RBP10.75□□□□□ -0.69
SCARB1-204ENST00000535005 ELOVL5Q9NYP7 299 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 CYB5R1Q9UHQ9 305 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 KCNG2Q9UJ96 466 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 SPATA2Q9UM82 520 aa10.75□□□□□ -0.69
SCARB1-204ENST00000535005 DAPL1A0PJW8 107 aa10.74□□□□□ -0.69
SCARB1-204ENST00000535005 AIPO00170 330 aa10.74□□□□□ -0.69
SCARB1-204ENST00000535005 GATBO75879 557 aaKnown RBP10.74□□□□□ -0.69
SCARB1-204ENST00000535005 MSR1P21757 451 aa10.74□□□□□ -0.69
SCARB1-204ENST00000535005 SSTR2P30874 369 aa10.74□□□□□ -0.69
SCARB1-204ENST00000535005 CDAP32320 146 aa10.74□□□□□ -0.69
SCARB1-204ENST00000535005 LSM6P62312 80 aaKnown RBP10.74□□□□□ -0.69
SCARB1-204ENST00000535005 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
SCARB1-204ENST00000535005 SFRP5Q5T4F7 317 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms