RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 GMPPAQ96IJ6 420 aaPredicted RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 URM1Q9BTM9 101 aaKnown RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 C20orf85Q9H1P6 137 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 SPRR3Q9UBC9 169 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 AQP7O14520 342 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 MELTFP08582 738 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 PRKACBP22694 351 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 EIF2S3P41091 472 aaKnown RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 ARL6IP1Q15041 203 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 KISS1Q15726 138 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 DEFB109BQ30KR1 87 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ZFP69Q49AA0 526 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ATAD3CQ5T2N8 411 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 MTFR2Q6P444 385 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 GLIPR1L1Q6UWM5 242 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 NAA40Q86UY6 237 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
BEST1-208ENST00000534553 AQP3Q92482 292 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 ST6GAL2Q96JF0 529 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 C1QTNF5Q9BXJ0 243 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
BEST1-208ENST00000534553 NCOA6Q14686 2063 aaPredicted RBP11.69□□□□□ -0.54
BEST1-208ENST00000534553 E9PLN8 166 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 RAB27BO00194 218 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 WT1P19544 449 aaPredicted RBP11.69□□□□□ -0.54
BEST1-208ENST00000534553 STOMP27105 288 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 AGTR1P30556 359 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 CCR6P51684 374 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 UNC119Q13432 240 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 RBMS2Q15434 407 aaKnown RBP11.69□□□□□ -0.54
BEST1-208ENST00000534553 PABPC1L2AQ5JQF8 200 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 RNFT1Q5M7Z0 435 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 SFRP5Q5T4F7 317 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 CD276Q5ZPR3 534 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 TMEM53Q6P2H8 277 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 IGFL3Q6UXB1 125 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 BIVMQ86UB2 503 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 ZADH2Q8N4Q0 377 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
BEST1-208ENST00000534553 TMEM229BQ8NBD8 167 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 AKR7LQ8NHP1 331 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 SARAFQ96BY9 339 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 MED30Q96HR3 178 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 S100A13Q99584 98 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 SOX7Q9BT81 388 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 KCNK15Q9H427 330 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 OPA3Q9H6K4 179 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 MCUBQ9NWR8 336 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 ZNF224Q9NZL3 707 aa11.69□□□□□ -0.54
BEST1-208ENST00000534553 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 SS18L1O75177 396 aaPredicted RBP11.68□□□□□ -0.54
BEST1-208ENST00000534553 NDUFB6O95139 128 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 TGM6O95932 706 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 CYB5AP00167 134 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 GTF2F2P13984 249 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 FAHP16930 419 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 MPGP29372 298 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 MECP2P51608 486 aaKnown RBP11.68□□□□□ -0.54
BEST1-208ENST00000534553 SRSF6Q13247 344 aaKnown RBP11.68□□□□□ -0.54
BEST1-208ENST00000534553 GSG1Q2KHT4 349 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 FBXW9Q5XUX1 488 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 P4HA3Q7Z4N8 544 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
BEST1-208ENST00000534553 STEAP2Q8NFT2 490 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 OR10R2Q8NGX6 335 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 SPSB4Q96A44 273 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 SEH1LQ96EE3 360 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 TMEM59Q9BXS4 323 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 MED28Q9H204 178 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
BEST1-208ENST00000534553 A0A0A6YYJ9 748 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 A0A1B0GUH1 482 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 GMDSO60547 372 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 CNOT4O95628 575 aaKnown RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 IGHV3-9P01782 118 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 SERPINA5P05154 406 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 GSTP1P09211 210 aaKnown RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 NAT2P11245 290 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 PTHLHP12272 177 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 TBPP20226 339 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 PTGFRP43088 359 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR3A2P47893 321 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 PLP2Q04941 152 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 MAB21L1Q13394 359 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR8B8Q15620 311 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 ZNF260Q3ZCT1 412 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 CLVS2Q5SYC1 327 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 METTL11BQ5VVY1 283 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 MRPL15Q9P015 296 aaKnown RBP11.67□□□□□ -0.54
BEST1-208ENST00000534553 CDC14BO60729 498 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 OR3A4PP47883 348 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 FAPQ12884 760 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 MEF2DQ14814 521 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 ZMYND11Q15326 602 aa11.67□□□□□ -0.54
BEST1-208ENST00000534553 SF3B4Q15427 424 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms