RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NABP1Q96AH0 204 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 FBXO17Q96EF6 278 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 ZNF75AQ96N20 296 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 NMNAT3Q96T66 252 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 FEVQ99581 238 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 DGCR6LQ9BY27 220 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 SYT4Q9H2B2 425 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 C1orf198Q9H425 327 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 EGLN3Q9H6Z9 239 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 ZNF442Q9H7R0 627 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 SRD5A3Q9H8P0 318 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 CDH20Q9HBT6 801 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 MSL2Q9HCI7 577 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 POLE4Q9NR33 117 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 VSX1Q9NZR4 365 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 PDP1Q9P0J1 537 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 TIMM10BQ9Y5J6 103 aa4.97□□□□□ -1.61
HMGB1P42-201ENST00000532126 CREBBPQ92793 2442 aa4.96□□□□□ -1.61
HMGB1P42-201ENST00000532126 LRBAP50851 2863 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 A0A0B4J293 547 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 C5orf49A4QMS7 147 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ARRDC5A6NEK1 342 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 H3BN98 237 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 H7C417 338 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 EBAG9O00559 213 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ST8SIA3O43173 380 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SPRY2O43597 315 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SOX14O95416 240 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 CST2P09228 141 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 CCL2P13500 99 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 HIST1H1CP16403 213 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ZNF32P17041 273 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 CCNOP22674 350 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 STOMP27105 288 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 APLNRP35414 380 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 LIPAP38571 399 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 GDI2P50395 445 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 RPS23P62266 143 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 PSG4Q00888 419 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SCRN3Q0VDG4 424 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 AQP6Q13520 282 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ENDOGQ14249 297 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 RAB35Q15286 201 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ZMYND11Q15326 602 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 EFNB3Q15768 340 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TBC1D28Q2M2D7 210 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TMEM268Q5VZI3 342 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 C11orf71Q6IPW1 123 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 LEG1Q6P5S2 330 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 UGT2A3Q6UWM9 527 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ASRGL1Q7L266 308 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TMEM179BQ7Z7N9 219 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TBC1D26Q86UD7 250 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SERPINA12Q8IW75 414 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 OR6V1Q8N148 313 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 CPEB3Q8NE35 698 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 OR2T33Q8NG76 320 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SLCO4A1Q96BD0 722 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 Q96MF0 132 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 FOXN4Q96NZ1 517 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TSSK2Q96PF2 358 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SNX18Q96RF0 628 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 NIPSNAP1Q9BPW8 284 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 WACQ9BTA9 647 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ZNF416Q9BWM5 594 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 TSSK6Q9BXA6 273 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 PLA2G12AQ9BZM1 189 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 OR2H1Q9GZK4 316 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 FN3KQ9H479 309 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 ZNF556Q9HAH1 456 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 RPRD1BQ9NQG5 326 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 MBNL3Q9NUK0 354 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SLCO1C1Q9NYB5 712 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 IL20Q9NYY1 176 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 OR6C3Q9NZP0 311 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 MGAT4CQ9UBM8 478 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 EIF3KQ9UBQ5 218 aaKnown RBP4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 PLA2G2DQ9UNK4 145 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 B9D1Q9UPM9 204 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 BAIAP2Q9UQB8 552 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 POLR1DQ9Y2S0 133 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 PMF1-BGLAPU3KQ54 211 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 MYO9AB2RTY4 2548 aa4.96□□□□□ -1.62
HMGB1P42-201ENST00000532126 SPG11Q96JI7 2443 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 IGLV1-36A0A0B4J1U3 117 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 DCTN6O00399 190 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 BHLHE40O14503 412 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 SGCEO43556 437 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 SSX4O60224 188 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 GPRIN2O60269 458 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 NDUFS7O75251 213 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 MPZL1O95297 269 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 SNAP29O95721 258 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 GPANK1O95872 356 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 IFNGP01579 166 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 IGHV4-39P01824 125 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 LCKP06239 509 aa4.95□□□□□ -1.62
HMGB1P42-201ENST00000532126 ERCC1P07992 297 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms