RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 OR5AS1Q8N127 324 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 PLPP7Q8NBV4 271 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 OR56B2PQ8NGI1 322 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TMEM106AQ96A25 262 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 CENPOQ9BU64 300 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 ZNF275Q9NSD4 429 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 ENPP5Q9UJA9 477 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 CEPT1Q9Y6K0 416 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 LOXP28300 417 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TGFBR1P36897 503 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 GNALP38405 381 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 RPS23P62266 143 aaKnown RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 PSG7Q13046 419 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TNK1Q13470 666 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 ALKBH6Q3KRA9 238 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TIMM50Q3ZCQ8 353 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 CD200R1LQ6Q8B3 271 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 LRP11Q86VZ4 500 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 NUP37Q8NFH4 326 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TMEM171Q8WVE6 324 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 ADAT3Q96EY9 351 aaPredicted RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 DERL3Q96Q80 235 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 SYT3Q9BQG1 590 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 PPIL3Q9H2H8 161 aaKnown RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 NOX4Q9NPH5 578 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 CA10Q9NS85 328 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TXNL4BQ9NX01 149 aaKnown RBP16.35■□□□□ 0.21
SMPD1-205ENST00000531303 V9GYS6 101 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 DOPEY2Q9Y3R5 2298 aa16.35■□□□□ 0.21
SMPD1-205ENST00000531303 TENM4Q6N022 2769 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 CD300LBA8K4G0 201 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 CD2P06729 351 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 RAC2P15153 192 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 ZNF12P17014 697 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 RIPPLY1Q0D2K3 151 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 DMRTC1Q5HYR2 192 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 TMEM255AQ5JRV8 349 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 SP5Q6BEB4 398 aaPredicted RBP16.34■□□□□ 0.21
SMPD1-205ENST00000531303 UNQ9370/PRO34162Q6UXP9 181 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 C1orf174Q8IYL3 243 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 SYNPRQ8TBG9 265 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 HAVCR1Q96D42 359 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 OPA3Q9H6K4 179 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 CMAHPQ9Y471 501 aa16.34■□□□□ 0.21
SMPD1-205ENST00000531303 LOC390937A0A1W2PQ73 354 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 E7EQL1 145 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 PIN1P1O15428 100 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 TIMM8AO60220 97 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 NOL3O60936 208 aaKnown RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 LILRA1O75019 489 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 SC5DO75845 299 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 GATBO75879 557 aaKnown RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 TUBG1P23258 451 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 MAPK3P27361 379 aaPredicted RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 CALRP27797 417 aaKnown RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 VBP1P61758 197 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 OR8B8Q15620 311 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 ACBD4Q8NC06 268 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 SPOCK3Q9BQ16 436 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 TUBG2Q9NRH3 451 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 PURGQ9UJV8 347 aaKnown RBP16.33■□□□□ 0.2
SMPD1-205ENST00000531303 GSTK1Q9Y2Q3 226 aa16.33■□□□□ 0.2
SMPD1-205ENST00000531303 UTP20O75691 2785 aaKnown RBP16.32■□□□□ 0.2
SMPD1-205ENST00000531303 TRBV5-7A0A0A0MS05 114 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 A6NNC1 897 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 OR4A8P0C604 315 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 NCS1P62166 190 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 DAZAP2Q15038 168 aaPredicted RBP16.32■□□□□ 0.2
SMPD1-205ENST00000531303 CTF1Q16619 201 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 HSD17B12Q53GQ0 312 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 MBNL2Q5VZF2 373 aaKnown RBP16.32■□□□□ 0.2
SMPD1-205ENST00000531303 CCDC54Q8NEL0 328 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 LILRB1Q8NHL6 650 aaPredicted RBP16.32■□□□□ 0.2
SMPD1-205ENST00000531303 PIGCQ92535 297 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 PPP1R3EQ9H7J1 279 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 TAS2R4Q9NYW5 299 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 CISD1Q9NZ45 108 aaKnown RBP16.32■□□□□ 0.2
SMPD1-205ENST00000531303 RHBDD3Q9Y3P4 386 aa16.32■□□□□ 0.2
SMPD1-205ENST00000531303 GABARAPO95166 117 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 COX6B1P14854 86 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 COL8A1P27658 744 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 KLF3P57682 345 aaPredicted RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 ADIPOQQ15848 244 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 PAMR1Q6UXH9 720 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 Q6ZSR3 168 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 MRPL24Q96A35 216 aaKnown RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 ISOC1Q96CN7 298 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 TMEM204Q9BSN7 226 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 PAPOLGQ9BWT3 736 aaKnown RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 MRPL37Q9BZE1 423 aaKnown RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 RBM38Q9H0Z9 239 aaKnown RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 GPR173Q9NS66 373 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 MYEF2Q9P2K5 600 aaKnown RBP16.31■□□□□ 0.2
SMPD1-205ENST00000531303 KCNN3Q9UGI6 736 aa16.31■□□□□ 0.2
SMPD1-205ENST00000531303 COL12A1Q99715 3063 aa16.3■□□□□ 0.2
SMPD1-205ENST00000531303 USP9YO00507 2555 aaPredicted RBP16.3■□□□□ 0.2
SMPD1-205ENST00000531303 TRAV8-7A0A075B6U6 113 aa16.3■□□□□ 0.2
SMPD1-205ENST00000531303 SMIM31A0A1B0GVY4 71 aa16.3■□□□□ 0.2
SMPD1-205ENST00000531303 A0A1W2PPW3 197 aa16.3■□□□□ 0.2
SMPD1-205ENST00000531303 A6NHS1 94 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms