RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ARPC2O15144 300 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 SEMG1P04279 462 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 GYPBP06028 91 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L2P0CJ85 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L3P0CJ86 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L4P0CJ87 422 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L5P0CJ88 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L6P0CJ89 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L7P0CJ90 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 PSKH1P11801 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 GNALP38405 381 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 CX3CR1P49238 355 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 ENTPD1P49961 510 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 CSNK2BP67870 215 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 IKZF1Q13422 519 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 TAF9Q16594 264 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4L9Q6RFH8 374 aaPredicted RBP13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 GDPGP1Q6ZNW5 385 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DPY19L4Q7Z388 723 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 LDLRAD3Q86YD5 345 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 CMTM4Q8IZR5 234 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 FAM216BQ8N7L0 139 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 LINC01006Q8NI28 216 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 CCL13Q99616 98 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 RBM4BQ9BQ04 359 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 PAPOLGQ9BWT3 736 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 SEMA6AQ9H2E6 1030 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 GORASP2Q9H8Y8 452 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DNAJC27Q9NZQ0 273 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 DUX4Q9UBX2 424 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 RPUSD1Q9UJJ7 312 aaKnown RBP13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
CHMP4A-204ENST00000530996 A0A0G2JK05 382 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 A0A1W2PRD5 423 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 A0A1W2PRF3 423 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 A0A1W2PRM7 423 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 NKX6-3A6NJ46 265 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 PAHP00439 452 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 FBP1P09467 338 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 EEF1B2P24534 225 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 FMO3P31513 532 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 OTX1P32242 354 aaPredicted RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 SLC15A1P46059 708 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 IER3P46695 156 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 OCLNQ16625 522 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 WDR38Q5JTN6 314 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 TEX36Q5VZQ5 186 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 RHOUQ7L0Q8 258 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 SLC36A1Q7Z2H8 476 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 C1QL4Q86Z23 238 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 FGFRL1Q8N441 504 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 SLC37A3Q8NCC5 494 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 H1FXQ92522 213 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 REEP6Q96HR9 211 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 KCNJ15Q99712 375 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 ELAC2Q9BQ52 826 aaKnown RBP13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 CNTD2Q9H8S5 307 aa13.05□□□□□ -0.32
CHMP4A-204ENST00000530996 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 TNFRSF11BO00300 401 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 SOX14O95416 240 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 TSPAN15O95858 294 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 PRDX6P30041 224 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 DDOSTP39656 456 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 KRTAP10-3P60369 221 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 GRB2P62993 217 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 ELF3P78545 371 aaPredicted RBP13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 PRB3Q04118 309 aaPredicted RBP13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 CRMP1Q14194 572 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 SAMD4BQ5PRF9 694 aaKnown RBP13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 ZNF511Q8NB15 262 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 OR6N2Q8NGY6 317 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 ZNRF4Q8WWF5 429 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 BTBD10Q9BSF8 475 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 BRD7Q9NPI1 651 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 KAAG1Q9UBP8 84 aa13.04□□□□□ -0.32
CHMP4A-204ENST00000530996 DHRS12A0PJE2 317 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 RIIAD1A6NNX1 92 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 ZNF593O00488 134 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 NDUFB3O43676 98 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 TIPRLO75663 272 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 CCNB2O95067 398 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 MUC1P15941 1255 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 NAA10P41227 235 aaPredicted RBP13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 MXRA7P84157 204 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 KLRD1Q13241 179 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 C2orf68Q2NKX9 166 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 C11orf91Q3C1V1 193 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 LRRC10Q5BKY1 277 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 ASPHD2Q6ICH7 369 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 FAM57BQ71RH2 274 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 WDR86Q86TI4 376 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 PIP4P2Q8N4L2 257 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 OR1M1Q8NGA1 313 aa13.03□□□□□ -0.32
CHMP4A-204ENST00000530996 OR8D4Q8NGM9 314 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms