RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NRIP3Q9NQ35 241 aa7.35□□□□□ -1.23
VPS11-203ENST00000529545 PRPF19Q9UMS4 504 aaKnown RBP7.35□□□□□ -1.23
VPS11-203ENST00000529545 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
VPS11-203ENST00000529545 IER3IP1Q9Y5U9 82 aa7.35□□□□□ -1.23
VPS11-203ENST00000529545 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 A0A087WUU8 490 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 A0A1W2PQ09 198 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 ANKRD30BLA7E2S9 258 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 M0R135 149 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 FCN3O75636 299 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 PPP1R3DO95685 299 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 RENP00797 406 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 NPPAP01160 153 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 HLA-DQA2P01906 255 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 FAHP16930 419 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 POU1F1P28069 291 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 GSK3BP49841 420 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 PCK2Q16822 640 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 KRTAP27-1Q3LI81 207 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 WDR38Q5JTN6 314 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 FOXB2Q5VYV0 432 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 SLC18B1Q6NT16 456 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 TBPL2Q6SJ96 375 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 DPY19L2P2Q6ZN68 376 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 CFAP77Q6ZQR2 320 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 PTCHD4Q6ZW05 846 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 CYP4Z1Q86W10 505 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 LINC00346Q8IVM7 164 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 LNX2Q8N448 690 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 PNKDQ8N490 385 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 OR9Q1Q8NGQ5 310 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 DYDC1Q8WWB3 177 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 C12orf43Q96C57 262 aaKnown RBP7.34□□□□□ -1.23
VPS11-203ENST00000529545 ZNF799Q96GE5 643 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 FAM46AQ96IP4 442 aaKnown RBP7.34□□□□□ -1.23
VPS11-203ENST00000529545 WWC2-AS2Q96NR7 200 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 TSSK2Q96PF2 358 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 GPX7Q96SL4 187 aaPredicted RBP7.34□□□□□ -1.23
VPS11-203ENST00000529545 DCTN5Q9BTE1 182 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 NSRP1Q9H0G5 558 aaKnown RBP7.34□□□□□ -1.23
VPS11-203ENST00000529545 OPA3Q9H6K4 179 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 B9D1Q9UPM9 204 aa7.34□□□□□ -1.23
VPS11-203ENST00000529545 RYR3Q15413 4870 aa7.34□□□□□ -1.24
VPS11-203ENST00000529545 NKX6-3A6NJ46 265 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 J3KTA2 159 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 M0R1W7 72 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 IMPA2O14732 288 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 ACOT8O14734 319 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 PTP4A3O75365 173 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 TIPRLO75663 272 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 TXNDC12O95881 172 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 TROVE2P10155 538 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS11-203ENST00000529545 ZNF823P16415 610 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 ZNF26P17031 533 aaPredicted RBP7.33□□□□□ -1.24
VPS11-203ENST00000529545 PAICSP22234 425 aaKnown RBP7.33□□□□□ -1.24
VPS11-203ENST00000529545 DDOSTP39656 456 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 CDKN2AP42771 156 aaKnown RBP7.33□□□□□ -1.24
VPS11-203ENST00000529545 ZNF92Q03936 586 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 AANATQ16613 207 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 ZBTB37Q5TC79 503 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 C11orf87Q6NUJ2 197 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 DPY19L4Q7Z388 723 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 CPLX4Q7Z7G2 160 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 FGFRL1Q8N441 504 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 FAM216BQ8N7L0 139 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 Q8N7P7 452 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 SLC26A10Q8NG04 563 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 OR2T12Q8NG77 320 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 OR56B2PQ8NGI1 322 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 OR5D13Q8NGL4 314 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 OR4C15Q8NGM1 316 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 OR2AE1Q8NHA4 323 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 C8orf46Q8TAG6 207 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 STON2Q8WXE9 905 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 TNFRSF14Q92956 283 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 TLCD1Q96CP7 247 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 MED30Q96HR3 178 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 NKX3-1Q99801 234 aaPredicted RBP7.33□□□□□ -1.24
VPS11-203ENST00000529545 TMEM120AQ9BXJ8 343 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 ANKRD19PQ9H560 264 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 KRCC1Q9NPI7 259 aaPredicted RBP7.33□□□□□ -1.24
VPS11-203ENST00000529545 KCNG2Q9UJ96 466 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 SIGLEC7Q9Y286 467 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 SNX13Q9Y5W8 968 aa7.33□□□□□ -1.24
VPS11-203ENST00000529545 IGLV1-36A0A0B4J1U3 117 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 A0A1B0GW55 424 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 UNC119BA6NIH7 251 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 FAM220BPB1ANY3 271 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 H0YAE9 185 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DCTN6O00399 190 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 FFAR1O14842 300 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 ANGPTL7O43827 346 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 GLCEO94923 617 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 ZNF682O95780 498 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DUX4L2P0CJ85 424 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DUX4L3P0CJ86 424 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DUX4L4P0CJ87 422 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DUX4L5P0CJ88 424 aa7.32□□□□□ -1.24
VPS11-203ENST00000529545 DUX4L6P0CJ89 424 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms