RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 MALLQ13021 153 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TMEM255AQ5JRV8 349 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 UNQ6126/PRO20091Q6UXV3 157 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 FBXW12Q6X9E4 464 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF704Q6ZNC4 412 aaPredicted RBP10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 USP43Q70EL4 1123 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PHC2Q8IXK0 858 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 KLF14Q8TD94 323 aaPredicted RBP10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 UFD1Q92890 307 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 BORCS5Q969J3 196 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MARVELD3Q96A59 401 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CMBLQ96DG6 245 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CA10Q9NS85 328 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 FZR1Q9UM11 496 aa10.44□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NOTCH2Q04721 2471 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CD1AP06126 327 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 UBCP0CG48 685 aaKnown RBP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CCL1P22362 96 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GADD45AP24522 165 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NCS1P62166 190 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RPS11P62280 158 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 FAM3AP98173 230 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TNK1Q13470 666 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GPR50Q13585 617 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TMEM244Q5VVB8 128 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RGS7BPQ6MZT1 257 aaPredicted RBP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 LRP11Q86VZ4 500 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 COMMD2Q86X83 199 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 C1orf174Q8IYL3 243 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PLPP7Q8NBV4 271 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR51A4Q8NGJ6 313 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR13C5Q8NGS8 318 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NDNFQ8TB73 568 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 AKAP1Q92667 903 aaKnown RBP eCLIP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 FAM71F1Q96KD3 344 aaPredicted RBP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 COMMD4Q9H0A8 199 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RGCCQ9H4X1 137 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF442Q9H7R0 627 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF281Q9Y2X9 895 aa10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PLCE1Q9P212 2302 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ABCA4P78363 2273 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 hCG_38984A0A1B0GV85 526 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 A0A1B0GVI7 797 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 LMX1BO60663 402 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF250P15622 560 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ACHEP22303 614 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TUBG1P23258 451 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MAGEB1P43366 347 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GSK3AP49840 483 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RPS23P62266 143 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RPS25P62851 125 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PSG7Q13046 419 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ADIPOQQ15848 244 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ALKBH6Q3KRA9 238 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF718Q3SXZ3 478 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF672Q499Z4 452 aaPredicted RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MBNL2Q5VZF2 373 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 Q6ZSR3 168 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PGAP1Q75T13 922 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 S100ZQ8WXG8 99 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RPL3LQ92901 407 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TMEM203Q969S6 136 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 HAVCR1Q96D42 359 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TMED9Q9BVK6 235 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SLIRPQ9GZT3 109 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 DCSTAMPQ9H295 470 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TUBG2Q9NRH3 451 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CISD1Q9NZ45 108 aaKnown RBP10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF391Q9UJN7 358 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ROS1P08922 2347 aa10.42□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SYT7O43581 403 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CTAG2O75638 210 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GOSR1O95249 250 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 RAC2P15153 192 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ACKR3P25106 362 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 INSL4Q14641 139 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR8B8Q15620 311 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR2T2Q6IF00 324 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 DOK3Q7L591 496 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR6Q1Q8NGQ2 317 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR14K1Q8NGZ2 314 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SYNPRQ8TBG9 265 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MRPL37Q9BZE1 423 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NXF2Q9GZY0 626 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MMP27Q9H306 513 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NDUFB11Q9NX14 153 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MYEF2Q9P2K5 600 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 HHLA2Q9UM44 414 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CMAHPQ9Y471 501 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 V9GYS6 101 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 NAV2Q8IVL1 2488 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 LOC390937A0A1W2PQ73 354 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CD300LBA8K4G0 201 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CLDN25C9JDP6 229 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 LILRA1O75019 489 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 DHRS3O75911 302 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR4A8P0C604 315 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms