RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FBXW4P57775 412 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 KRTAP10-3P60369 221 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 ZNF85Q03923 595 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 ST3GAL3Q11203 375 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 EIF2B1Q14232 305 aaKnown RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 RAB35Q15286 201 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 CD226Q15762 336 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 VWA2Q5GFL6 755 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 PVRIGQ6DKI7 326 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 AHSA2Q719I0 299 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 TSEN54Q7Z6J9 526 aaKnown RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 FBXO16Q8IX29 292 aaPredicted RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 HS3ST5Q8IZT8 346 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 Q8N402 240 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 LRRC52Q8N7C0 313 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 ITFG1Q8TB96 612 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 TBCKQ8TEA7 893 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 STMN2Q93045 179 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 CMTM5Q96DZ9 223 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 SGTBQ96EQ0 304 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 OXGR1Q96P68 337 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 FAIM2Q9BWQ8 316 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 NLE1Q9NVX2 485 aaPredicted RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 RHBDL2Q9NX52 303 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 CCDC59Q9P031 241 aaKnown RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 VAPAQ9P0L0 249 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 Q9Y3F1 56 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 UBIAD1Q9Y5Z9 338 aa4.42□□□□□ -1.7
PCF11-202ENST00000528336 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
PCF11-202ENST00000528336 LCTP09848 1927 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 MYH6P13533 1939 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 IGLV3-22A0A075B6J6 115 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 FAM231BA6NCW3 169 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 VSTM2BA6NLU5 285 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 FOXI3A8MTJ6 420 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 RNF212BA8MTL3 300 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 IDSB3KWA1 339 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TRDCB7Z8K6 153 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 K7ERI5 159 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 GATCO43716 136 aaKnown RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 ORM1P02763 201 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 FCGR3AP08637 254 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ZNF35P13682 527 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 CBR1P16152 277 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 RAB4AP20338 218 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TFPI2P48307 235 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 PSMD7P51665 324 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 SLC35B1P78383 322 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 VLDLRP98155 873 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 C2orf54Q08AI8 447 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 NAB1Q13506 487 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ZNHIT3Q15649 155 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 UNC50Q53HI1 259 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 CARD16Q5EG05 197 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ACTL10Q5JWF8 245 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 WDR25Q64LD2 544 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 DRAM2Q6UX65 266 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 CMC1Q7Z7K0 106 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TAC4Q86UU9 113 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 KIF2BQ8N4N8 673 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TBC1D19Q8N5T2 526 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TMEM251Q8N6I4 163 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ZNF740Q8NDX6 193 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 LFNGQ8NES3 379 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 DTD1Q8TEA8 209 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 MRPS31Q92665 395 aaKnown RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 UFD1Q92890 307 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 HGDQ93099 445 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 YIPF6Q96EC8 236 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 RNF145Q96MT1 663 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 PRRT1Q99946 306 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ACP6Q9NPH0 428 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ZNF446Q9NWS9 450 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 PAK1IP1Q9NWT1 392 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 CLN6Q9NWW5 311 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 ERVW-1Q9UQF0 538 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 POLR3HQ9Y535 204 aaPredicted RBP4.41□□□□□ -1.7
PCF11-202ENST00000528336 WIF1Q9Y5W5 379 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 CACNG2Q9Y698 323 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 V9GYQ6 96 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 BRCA2P51587 3418 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 PLXNA1Q9UIW2 1896 aa4.41□□□□□ -1.7
PCF11-202ENST00000528336 KIAA0100Q14667 2235 aaKnown RBP4.4□□□□□ -1.7
PCF11-202ENST00000528336 TRAV9-2A0A087WT02 112 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 GLYATL1P3A0A0U1RQE8 302 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 TSPAN11A1L157 253 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 VPS37CA5D8V6 355 aaPredicted RBP4.4□□□□□ -1.71
PCF11-202ENST00000528336 GOLGA6L4A6NEF3 574 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 OR5B21A6NL26 309 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 H3BMQ9 156 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 GFYI3L273 518 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 M0R036 132 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 SOX15O60248 233 aa4.4□□□□□ -1.71
PCF11-202ENST00000528336 ALOX12BO75342 701 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms