RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CSNK1A1P48729 337 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CDC34P49427 236 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 P2RX1P51575 399 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 NCBP2P52298 156 aaKnown RBP eCLIP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PLTPP55058 493 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UBE2MP61081 183 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 VBP1P61758 197 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB11AP62491 216 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DYNLL1P63167 89 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAD51Q06609 339 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF33AQ06730 810 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PPIDQ08752 370 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 STX4Q12846 297 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 STX3Q13277 289 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PMS2P3Q13401 168 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 XRCC4Q13426 336 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PIGHQ14442 188 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF266Q14584 549 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 USF2Q15853 346 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RAB11BQ15907 218 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SNCBQ16143 134 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GABRA6Q16445 453 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SNRNP35Q16560 246 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZSCAN26Q16670 478 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 HNRNPA1L2Q32P51 320 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DNAL1Q4LDG9 190 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ORMDL2Q53FV1 153 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SMUG1Q53HV7 270 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LIN9Q5TKA1 542 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 STUMQ69YW2 141 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PTRHD1Q6GMV3 140 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ADNP2Q6IQ32 1131 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC25A25Q6KCM7 469 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ULK3Q6PHR2 472 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DEGS2Q6QHC5 323 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TMPRSS11AQ6ZMR5 421 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 Q6ZS52 159 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LINC00336Q6ZUF6 198 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MBOAT2Q6ZWT7 520 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 NDUFAF7Q7L592 441 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SSX6Q7RTT6 188 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LINC00523Q86TU6 105 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SETD3Q86TU7 594 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 THOC6Q86W42 341 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RBM45Q8IUH3 476 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 APRG1Q8IVJ8 170 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 FUNDC1Q8IVP5 155 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 C10orf107Q8IVU9 208 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CDKL3Q8IVW4 592 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LRRC8AQ8IWT6 810 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UBALD2Q8IYN6 164 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ST13P4Q8IZP2 240 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 FAM58AQ8N1B3 248 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 METTL13Q8N6R0 699 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 DNAAF3Q8N9W5 541 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UBAC2Q8NBM4 344 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PROKR2Q8NFJ6 384 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR51L1Q8NGJ5 315 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR9G4Q8NGQ1 327 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR6Q1Q8NGQ2 317 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 LYPD6BQ8NI32 183 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZNF461Q8TAF7 563 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR51E1Q8TCB6 317 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ACMSDQ8TDX5 336 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GPX8Q8TED1 209 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MITD1Q8WV92 249 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 CDKL2Q92772 493 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 EEF1AKMT3Q96AZ1 226 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TMEM159Q96B96 161 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZBED3Q96IU2 234 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 PPP1R36Q96LQ0 422 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 C9orf72Q96LT7 481 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GLT1D1Q96MS3 346 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 COL21A1Q96P44 957 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 OR2A5Q96R48 311 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TEAD3Q99594 435 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GPR21Q99679 349 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 APOL4Q9BPW4 351 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SULT4A1Q9BR01 284 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SPZ1Q9BXG8 430 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MRPS26Q9BYN8 205 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ZYG11BQ9C0D3 744 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ACTR3CQ9C0K3 210 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 IL22Q9GZX6 179 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 TOLLIPQ9H0E2 274 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RACGAP1Q9H0H5 632 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 HDHD2Q9H0R4 259 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ELOVL6Q9H5J4 265 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 C8orf33Q9H7E9 229 aaPredicted RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 GEMIN7Q9H840 131 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UGT1A7Q9HAW7 530 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UGT1A10Q9HAW8 530 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 UGT1A8Q9HAW9 530 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC38A10Q9HBR0 1119 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 ANKHQ9HCJ1 492 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 RETNQ9HD89 108 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 SLC40A1Q9NP59 571 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 EXOSC4Q9NPD3 245 aaKnown RBP0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 FGFR1OP2Q9NVK5 253 aa0.86□□□□□ -2.27
ECHDC1-219ENST00000526299 MCUBQ9NWR8 336 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms