RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CNKSR3Q6P9H4 555 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 OPN5Q6U736 354 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 OR5D18Q8NGL1 313 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 C16orf58Q96GQ5 468 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 SGPP1Q9BX95 441 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 SMIM3Q9BZL3 60 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 GLIPR2Q9H4G4 154 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 RAB18Q9NP72 206 aa10.75□□□□□ -0.69
SPIDR-217ENST00000522117 ANAPC1Q9H1A4 1944 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 TMEM202A6NGA9 273 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 PLPP1O14494 284 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 RPP14O95059 124 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 RHOCP08134 193 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FBXO45P0C2W1 286 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FOLR1P15328 257 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FCGR2CP31995 323 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 NOVA1P51513 510 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 PRPS1P60891 318 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 COL9A2Q14055 689 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 NKAIN1Q4KMZ8 207 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 OR8G2PQ6IF36 304 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 KLHL24Q6TFL4 600 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 ZNF429Q86V71 674 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 ZNF100Q8IYN0 542 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 LYG1Q8N1E2 194 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 C12orf76Q8N812 135 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 OR1L6Q8NGR2 347 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 OR10AC1Q8NH08 325 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 RNF128Q8TEB7 428 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 TSLPQ969D9 159 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 EFCAB11Q9BUY7 163 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.74□□□□□ -0.695e-7■■■■■ 41.3
SPIDR-217ENST00000522117 AURKAIP1Q9NWT8 199 aaPredicted RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 SRP19P09132 144 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 RPL12P30050 165 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 CHRNB4P30926 498 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 RND2P52198 227 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 GAS6Q14393 721 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 BATFQ16520 125 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 SHISA2Q6UWI4 295 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 CXCL17Q6UXB2 119 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 KMT5CQ86Y97 462 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 TVP23CQ96ET8 276 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 SLC41A2Q96JW4 573 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 PRAP1Q96NZ9 151 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 CREBZFQ9NS37 354 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FCF1Q9Y324 198 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 MRPS2Q9Y399 296 aaKnown RBP10.74□□□□□ -0.69
SPIDR-217ENST00000522117 FTCDNL1E5RQL4 147 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 XKRYO14609 159 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ONECUT2O95948 504 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 UMODP07911 640 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 SEC11BP0C7V7 166 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 TDGF1P13385 188 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CXCR1P25024 350 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 PDLIM4P50479 330 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 TMEM33P57088 247 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 S100A10P60903 97 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 NHLH1Q02575 133 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CNN3Q15417 329 aaKnown RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 RAB11BQ15907 218 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 TRIM61Q5EBN2 209 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CHST9Q7L1S5 443 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 LRP11Q86VZ4 500 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ZNF679Q8IYX0 411 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 GBGT1Q8N5D6 347 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 OR51A7Q8NH64 312 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 GINS3Q9BRX5 216 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 PRSS16Q9NQE7 514 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 B3GAT1Q9P2W7 334 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 DKKL1Q9UK85 242 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 LOC105371242A0A075B767 164 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ERAL1O75616 437 aaKnown RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 NDUFB8O95169 186 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 LYPD3O95274 346 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 AHSA1O95433 338 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 HMGN2P05204 90 aaKnown RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ATP1B2P14415 290 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ZNF708P17019 499 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 SERPINA2P20848 420 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CRYBB1P53674 252 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 TBPL1P62380 186 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CCL20P78556 96 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 P2RY6Q15077 328 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 RNF219Q5W0B1 726 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-217ENST00000522117 FAM166AQ6J272 317 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 ZNF584Q8IVC4 421 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 APCDD1LQ8NCL9 501 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 OR52E2Q8NGJ4 325 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 CXorf40AQ8TE69 158 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 HIST1H2AAQ96QV6 131 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 OR11A1Q9GZK7 315 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 OSGIN2Q9Y236 505 aa10.73□□□□□ -0.69
SPIDR-217ENST00000522117 A0A1B0GTH9 108 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms