RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 RAB3DO95716 219 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 LSM8O95777 96 aaKnown RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 TGM6O95932 706 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 ARG1P05089 322 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 DNAH10OSP0CZ25 163 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 PGA4P0DJD7 388 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 PGA3P0DJD8 388 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 PGA5P0DJD9 388 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 MDKP21741 143 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 FABP6P51161 128 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 ATP6V0D1P61421 351 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 LCN2P80188 198 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 MADCAM1Q13477 382 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZBED5Q49AG3 693 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 CEMP1Q6PRD7 247 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 IGFL2Q6UWQ7 119 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 LRRC8AQ8IWT6 810 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 CCDC112Q8NEF3 446 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR10W1Q8NGF6 305 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 CREB3L1Q96BA8 519 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 NRBF2Q96F24 287 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 LZTS2Q9BRK4 669 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 NAA50Q9GZZ1 169 aaKnown RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 BOLA2Q9H3K6 86 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 SAV1Q9H4B6 383 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZSCAN16Q9H4T2 348 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 UBE2ZQ9H832 354 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 NANOGQ9H9S0 305 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 SLC40A1Q9NP59 571 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 DEC1Q9P2X7 70 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 RPS6KB2Q9UBS0 482 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZMAT5Q9UDW3 170 aaKnown RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 PCYOX1Q9UHG3 505 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 BRWD3Q6RI45 1802 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 PCDH11XQ9BZA7 1347 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 LOC100653049A0A140TA62 436 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PINLYPA6NC86 204 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 GOLGA6L4A6NEF3 574 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 FAM25EA8MYX2 175 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 E7EWF7 191 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 H3BQV1 296 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 H7C417 338 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PES1O00541 588 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 KRT34O76011 436 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 FGFR1OPO95684 399 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CTSLP07711 333 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 HSPD1P10809 573 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 GGT1P19440 569 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 GPR1P46091 355 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CCR6P51684 374 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CDH17Q12864 832 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 DNAJC3Q13217 504 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CAPRIN1Q14444 709 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 MPPED2Q15777 294 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PSMD5Q16401 504 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 C5orf64Q2M2E5 130 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PIGGQ5H8A4 983 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 WDR82Q6UXN9 313 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 C12orf56Q8IXR9 622 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 KRT222Q8N1A0 295 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 FAM86B1Q8N7N1 296 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 LINC00301Q8NCQ3 95 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 OR10G4Q8NGN3 311 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 ITFG1Q8TB96 612 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZFP90Q8TF47 636 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CACNG8Q8WXS5 425 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 FAM210BQ96KR6 192 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZNF396Q96N95 335 aaPredicted RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PIGUQ9H490 435 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 RPP21Q9H633 154 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 PATZ1Q9HBE1 687 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 ABCB10Q9NRK6 738 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 MTFP1Q9UDX5 166 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CD84Q9UIB8 345 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 CFAP45Q9UL16 551 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 SAR1BQ9Y6B6 198 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 LTBP4Q8N2S1 1624 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 ANK1P16157 1881 aa2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 BRCA1P38398 1863 aaKnown RBP2.2□□□□□ -2.06
HMGN1P28-201ENST00000521340 SCN9AQ15858 1988 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 ASTN1O14525 1302 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 ZSWIM8A7E2V4 1837 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 COL11A1P12107 1806 aaPredicted RBP2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 SCN4AP35499 1836 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 NACAE9PAV3 2078 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 LCTP09848 1927 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 C10orf71Q711Q0 1435 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 GOLGA6L19H0YKK7 550 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 H7C1H1 209 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 RNF113AO15541 343 aaKnown RBP2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 TDP2O95551 362 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 KLF8O95600 359 aaPredicted RBP2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 CSTAP01040 98 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 EIF4EP06730 217 aaKnown RBP2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 KLK1P06870 262 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 IVLP07476 585 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 PNMA6AP0CW24 399 aaPredicted RBP2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 RAB3BP20337 219 aa2.19□□□□□ -2.06
HMGN1P28-201ENST00000521340 HOXA9P31269 272 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms