RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 MTFP1Q9UDX5 166 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 TRMT112Q9UI30 125 aaKnown RBP2.78□□□□□ -1.96
SQLE-204ENST00000520493 CD84Q9UIB8 345 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 AP3M1Q9Y2T2 418 aa2.78□□□□□ -1.96
SQLE-204ENST00000520493 PUS1Q9Y606 427 aaKnown RBP eCLIP2.78□□□□□ -1.96
SQLE-204ENST00000520493 LINC01619G3V211 115 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 GOLGA8RI6L899 631 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 TOR1AO14656 332 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 ITGB1BP1O14713 200 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SGCEO43556 437 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 RAD1O60671 282 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 RDH16O75452 317 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SLC35E2BP0CK96 405 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 CNR1P21554 472 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 CTRLP40313 264 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 HCAR3P49019 387 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 GNB2P62879 340 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 UBE2IP63279 158 aaKnown RBP2.77□□□□□ -1.97
SQLE-204ENST00000520493 NDPQ00604 133 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 HMGCS1Q01581 520 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 DGCR6Q14129 220 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 HERPUD1Q15011 391 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 OR2T5Q6IEZ7 315 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 LYPD2Q6UXB3 125 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 FBXW12Q6X9E4 464 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SETD3Q86TU7 594 aaPredicted RBP2.77□□□□□ -1.97
SQLE-204ENST00000520493 TMEM25Q86YD3 366 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SLC30A8Q8IWU4 369 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 UBAC2Q8NBM4 344 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 NECAP1Q8NC96 275 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 OR2T29Q8NH02 315 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 RORBQ92753 470 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 TNFRSF14Q92956 283 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 HAUS1Q96CS2 278 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 FAM210BQ96KR6 192 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 FAM19A4Q96LR4 140 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 ZNF75AQ96N20 296 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 WFIKKN1Q96NZ8 548 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 OR2M2Q96R28 347 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 CTRCQ99895 268 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SULT4A1Q9BR01 284 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 ZNF251Q9BRH9 671 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 PRORYQ9H606 182 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 METTL8Q9H825 291 aaKnown RBP2.77□□□□□ -1.97
SQLE-204ENST00000520493 NANOGQ9H9S0 305 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 FBXO8Q9NRD0 319 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 IL17CQ9P0M4 197 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 CYB5R1Q9UHQ9 305 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 PSG8Q9UQ74 426 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 SLC22A14Q9Y267 594 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 TRAPPC4Q9Y296 219 aa2.77□□□□□ -1.97
SQLE-204ENST00000520493 PCDH11XQ9BZA7 1347 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 PLAC8L1A1L4L8 177 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 NKX2-6A6NCS4 301 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 F8VZ95 297 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 M0R1B8 84 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 KLF8O95600 359 aaPredicted RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 ACTL6AO96019 429 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 FABP3P05413 133 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 S100A6P06703 90 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 CTSLP07711 333 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 CD3GP09693 182 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 OCMP0CE72 109 aaPredicted RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 LIPCP11150 499 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 RCC1P18754 421 aaPredicted RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 TEAD1P28347 426 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 UGT2B10P36537 528 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 NUDT1P36639 197 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 RPS9P46781 194 aaKnown RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 CYB561P49447 251 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 SYNJ2BPP57105 145 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 UBE2NP61088 152 aaKnown RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 SLC35A1P78382 337 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 DAZ2Q13117 558 aaKnown RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 CAPRIN1Q14444 709 aaKnown RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 ZNF266Q14584 549 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 PSG5Q15238 335 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 RGNQ15493 299 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 ZNF630Q2M218 657 aaPredicted RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 RESP18Q5W5W9 173 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 ARL9Q6T311 187 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 SSX7Q7RTT5 188 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 FAM19A1Q7Z5A9 133 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 LRRC6Q86X45 466 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 NELFCDQ8IXH7 590 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 COX18Q8N8Q8 333 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 DCAF4L2Q8NA75 395 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 ZNF738Q8NE65 137 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 OR11H7Q8NGC8 314 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 OR10G4Q8NGN3 311 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 ADTRPQ96IZ2 230 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 ZNF514Q96K75 400 aaPredicted RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 RDH12Q96NR8 316 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 GABRG3Q99928 467 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 SLIRPQ9GZT3 109 aaKnown RBP2.76□□□□□ -1.97
SQLE-204ENST00000520493 SRRQ9GZT4 340 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 TOLLIPQ9H0E2 274 aa2.76□□□□□ -1.97
SQLE-204ENST00000520493 MYOZ1Q9NP98 299 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms