RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ZNF726A6NNF4 738 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 ENO4A6NNW6 628 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 C11orf98E9PRG8 122 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 BLOC1S5-TXNDC5H3BN57 136 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TRIM77I1YAP6 450 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PDLIM1O00151 329 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 FFAR1O14842 300 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 ARPC2O15144 300 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 RNF13O43567 381 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TRAF3IP2O43734 574 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-208ENST00000520228 CIDEAO60543 219 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 UPK3AO75631 287 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 OR7A10O76100 309 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 IGF2P01344 180 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 FRMD6-AS1P0C7T7 363 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 ASAH2BP0C7U1 165 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 FUT1P19526 365 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 MPZP25189 248 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 CDKN1AP38936 164 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 UGT2B15P54855 530 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TRAM2Q15035 370 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PPA1Q15181 289 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 GABRA6Q16445 453 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 CARD17Q5XLA6 110 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PRR27Q6MZM9 219 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 ZNF730Q6ZMV8 503 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TRPM8Q7Z2W7 1104 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 NANOGNBQ7Z5D8 188 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 OFCC1Q8IZS5 231 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 GPR137CQ8N3F9 429 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 FAM86B1Q8N7N1 296 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 NPEPL1Q8NDH3 523 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 OR1J1Q8NGS3 322 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PFN4Q8NHR9 129 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 MCUR1Q96AQ8 359 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PYURFQ96I23 114 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 NSMCE2Q96MF7 247 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 MUS81Q96NY9 551 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 OR2M2Q96R28 347 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 SEPHS2Q99611 448 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 RHNO1Q9BSD3 238 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TRAF4Q9BUZ4 470 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-208ENST00000520228 EMC6Q9BV81 110 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 LINC00470Q9BZP3 86 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 LIME1Q9H400 295 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 PLEKHF2Q9H8W4 249 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 NMNAT1Q9HAN9 279 aaPredicted RBP5.86□□□□□ -1.47
SDCBP-208ENST00000520228 TAS2R5Q9NYW4 299 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 CACNA1CQ13936 2221 aa5.86□□□□□ -1.47
SDCBP-208ENST00000520228 INTS1Q8N201 2190 aaKnown RBP5.86□□□□□ -1.47
SDCBP-208ENST00000520228 CSMD1Q96PZ7 3565 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PN81 502 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 A0A1W2PPR1 153 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 PMS2P5A8MQ11 134 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 hCG_2039718K7EN88 272 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 M0R3G1 203 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 IFI30P13284 250 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 LOXP28300 417 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-208ENST00000520228 CHRNA7P36544 502 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 AQP2P41181 271 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 ZNF83P51522 516 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 CDH11P55287 796 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 BIDP55957 195 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 PRPS1P60891 318 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 ZP4Q12836 540 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 HIKESHIQ53FT3 197 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 ARMC4Q5T2S8 1044 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 TBPL2Q6SJ96 375 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 NHLRC1Q6VVB1 395 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 Q6ZTC4 211 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 SLC35D2Q76EJ3 337 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 TSEN54Q7Z6J9 526 aaKnown RBP5.85□□□□□ -1.47
SDCBP-208ENST00000520228 CENPVQ7Z7K6 275 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-208ENST00000520228 NRMQ8IXM6 262 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 C20orf196Q8IYI0 205 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 CDK20Q8IZL9 346 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 TMEM123Q8N131 208 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 C17orf78Q8N4C9 275 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 WDR31Q8NA23 367 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 OR6N1Q8NGY5 312 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 OR52N5Q8NH56 324 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 ACOT11Q8WXI4 607 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-208ENST00000520228 BPIFA2Q96DR5 249 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 C7orf34Q96L11 122 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 LRR1Q96L50 414 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 ALKBH3Q96Q83 286 aaPredicted RBP5.85□□□□□ -1.47
SDCBP-208ENST00000520228 C1QTNF6Q9BXI9 259 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 CRLF2Q9HC73 371 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 B3GAT2Q9NPZ5 323 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 MAN2C1Q9NTJ4 1040 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 MED29Q9NX70 200 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 TAS2R1Q9NYW7 299 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 PLEKHA6Q9Y2H5 1048 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 SLC25A15Q9Y619 301 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 V9GYQ6 96 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 PCNX3Q9H6A9 2034 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 PDZD2O15018 2839 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 OTOGQ6ZRI0 2925 aa5.85□□□□□ -1.47
SDCBP-208ENST00000520228 TEP1Q99973 2627 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms