RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 NPIPA1Q9UND3 350 aa4.46□□□□□ -1.69
SDC2-204ENST00000519914 HDGFL3Q9Y3E1 203 aa4.46□□□□□ -1.69
SDC2-204ENST00000519914 SIT1Q9Y3P8 196 aa4.46□□□□□ -1.69
SDC2-204ENST00000519914 WIF1Q9Y5W5 379 aa4.46□□□□□ -1.69
SDC2-204ENST00000519914 MRPS18BQ9Y676 258 aaKnown RBP4.46□□□□□ -1.69
SDC2-204ENST00000519914 CEP290O15078 2479 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 COL27A1Q8IZC6 1860 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 METTL21EPA6NDL7 271 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 RFPL4AA6NLU0 287 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 F5H5P2 479 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 RFPL4AL1F8VTS6 287 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 L7N2F9 121 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TRAF3IP2O43734 574 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 SDC3O75056 442 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 CA11O75493 328 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 RAB3DO95716 219 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 NUDT14O95848 222 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 CFDP00746 253 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 PLGP00747 810 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 FSHBP01225 129 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 HLA-DQA2P01906 255 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TTRP02766 147 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 CD3DP04234 171 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FABP1P07148 127 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 HEXBP07686 556 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 ERCC1P07992 297 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 CHRM2P08172 466 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PGA4P0DJD7 388 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PGA3P0DJD8 388 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FGF5P12034 268 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PTHLHP12272 177 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 NR2C1P13056 603 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 GTF2F2P13984 249 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 MPGP29372 298 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 S100A11P31949 105 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 EIF1P41567 113 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 ALDH3B1P43353 468 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 DNASE1L1P49184 302 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 H2BFSP57053 126 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FBXW4P57775 412 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 UBE2MP61081 183 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 HIST1H3AP68431 136 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 DCDP81605 110 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 ZXDAP98168 799 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TLE3Q04726 772 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FGL1Q08830 312 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 GK2Q14410 553 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 ZNF345Q14585 488 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 HLXQ14774 488 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR7A5Q15622 319 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FAM189A2Q15884 450 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 AANATQ16613 207 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PNLIPRP3Q17RR3 467 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 LY6G6FQ5SQ64 297 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 GLYATL3Q5SZD4 288 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 C10orf128Q5T292 105 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 ATPAF1Q5TC12 328 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 HIST2H3PS2Q5TEC6 136 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 C1orf189Q5VU69 101 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 RGS7BPQ6MZT1 257 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 PAPD4Q6PIY7 484 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 TSSK4Q6SA08 328 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 C3P1Q6ZMU1 363 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 HIST2H3AQ71DI3 136 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OVCH2Q7RTZ1 564 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 SLC25A42Q86VD7 318 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 COMMD7Q86VX2 200 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 MUC20Q8N307 709 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 SLC22A24Q8N4F4 322 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PAQR4Q8N4S7 273 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 DEFB119Q8N690 84 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR2M3Q8NG83 312 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR1M1Q8NGA1 313 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR51A2Q8NGJ7 313 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR51S1Q8NGJ8 323 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR10S1Q8NGN2 331 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR5M8Q8NGP6 311 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR13C3Q8NGS6 347 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 OR13C8Q8NGS7 320 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 ELP5Q8TE02 316 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 SCARB1Q8WTV0 552 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 C11orf40Q8WZ69 217 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 FAM46BQ96A09 425 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 CPNE4Q96A23 557 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 SLAMF6Q96DU3 332 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TMEM68Q96MH6 324 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 SFXN2Q96NB2 322 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 NPAS1Q99742 590 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 CMKLR1Q99788 373 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PRRT1Q99946 306 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 DPCDQ9BVM2 203 aaPredicted RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 ATG5Q9H1Y0 275 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 WDR54Q9H977 334 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 SH2D2AQ9NP31 389 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 TMEM138Q9NPI0 162 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 PNRC2Q9NPJ4 139 aaKnown RBP4.46□□□□□ -1.7
SDC2-204ENST00000519914 NKIRAS2Q9NYR9 191 aa4.46□□□□□ -1.7
SDC2-204ENST00000519914 MYOTQ9UBF9 498 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms