RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NRMQ8IXM6 262 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 FBXL16Q8N461 479 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIF2BQ8N4N8 673 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 TEX29Q8N6K0 151 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 CNEP1R1Q8N9A8 125 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR4Q3Q8NH05 313 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 GPR151Q8TDV0 419 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 TOMM40LQ969M1 308 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 HAVCR1Q96D42 359 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 MS4A14Q96JA4 679 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 CNN2Q99439 309 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 MCHR1Q99705 422 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 IKZF5Q9H5V7 419 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 NARFLQ9H6Q4 476 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM185BQ9H7F4 350 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 AUNIPQ9H7T9 357 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 ISG20L2Q9H9L3 353 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 STOX2Q9P2F5 926 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 RPUSD1Q9UJJ7 312 aaKnown RBP3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIAA1257Q9ULG3 409 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 PRSS21Q9Y6M0 314 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNAH7Q8WXX0 4024 aa3.62□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1B0GUS0 222 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 SERTM2A0A1B0GWG4 89 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 NCF1BA6NI72 391 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 NCF1CA8MVU1 366 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 CST1P01037 141 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 RALBP11234 206 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 LAMP1P11279 417 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGHV1-2P23083 117 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 NTSP30990 170 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 RRM2P31350 389 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 IL2RGP31785 369 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 GTF2H1P32780 548 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 LEPP41159 167 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIR2DS2P43631 304 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 YAP1P46937 504 aaKnown RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 CSNK1DP48730 415 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 CDK16Q00536 496 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 SCRN3Q0VDG4 424 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 MERTKQ12866 999 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 BAMBIQ13145 260 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMED1Q13445 227 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 SERTAD2Q14140 314 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNHIT3Q15649 155 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 VPS26BQ4G0F5 336 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM205Q6UW68 189 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 EIF3MQ7L2H7 374 aaKnown RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF547Q8IVP9 402 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 FGFRL1Q8N441 504 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 SIGLECL1Q8N7X8 197 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 ITLN1Q8WWA0 313 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 RASL10AQ92737 203 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 NTAN1Q96AB6 310 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 FOXN4Q96NZ1 517 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 NRTNQ99748 197 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRIM45Q9H8W5 580 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 CRLF2Q9HC73 371 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 B3GNT2Q9NY97 397 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR12D3Q9UGF7 316 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 RIMS3Q9UJD0 308 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 STAP1Q9ULZ2 295 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 STARD10Q9Y365 291 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 HEBP2Q9Y5Z4 205 aa3.61□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGLV3-12A0A075B6K2 115 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 C1orf232A0A0U1RR37 186 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 TCRBV9S1A1TA0A576 114 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 C5orf63A6NC05 138 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 NDUFS8O00217 210 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 ABCD4O14678 606 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 SOX15O60248 233 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GALR3O60755 368 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GPX5O75715 221 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 POP7O75817 140 aaKnown RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLSO94925 669 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 LYPD3O95274 346 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CTDNEP1O95476 244 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM50AO95807 157 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CD8AP01732 235 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CRYBA1P05813 215 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 STAG3L3P0CL85 134 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PGAM2P15259 253 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 MAGP20916 626 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PTBP1P26599 531 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GCKP35557 465 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNASE1L1P49184 302 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 RAB9AP51151 201 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 SSR4P51571 173 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 EFNA4P52798 201 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 STC1P52823 247 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CDH6P55285 790 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GK3PQ14409 553 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 MICBQ29980 383 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PARP15Q460N3 678 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLIPR1L2Q4G1C9 344 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 HENMT1Q5T8I9 393 aaKnown RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 ARCQ7LC44 396 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms