RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TUBG2Q9NRH3 451 aa2.68□□□□□ -1.98
HMGCS1-207ENST00000514610 RHBDL2Q9NX52 303 aa2.68□□□□□ -1.98
HMGCS1-207ENST00000514610 IGHV3-49A0A0A0MS15 119 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 TMEM120BA0PK00 339 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 TAAR5O14804 337 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 TGM6O95932 706 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 RAB5AP20339 215 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 CD82P27701 267 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 CLDN18P56856 261 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 SLC25A35Q3KQZ1 300 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 GUSBP11Q6P575 273 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 MIR7-3HGQ8N6C7 128 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 BBOF1Q8ND07 529 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 GLYATL2Q8WU03 294 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 CPNE4Q96A23 557 aaPredicted RBP2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 C9orf72Q96LT7 481 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 GPR21Q99679 349 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 PRSS16Q9NQE7 514 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 RBFOX1Q9NWB1 397 aaKnown RBP2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 ZNF257Q9Y2Q1 563 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 TTC41PQ6P2S7 1318 aa2.67□□□□□ -1.98
HMGCS1-207ENST00000514610 A0A1B0GUH1 482 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 ZNF99A8MXY4 864 aaPredicted RBP2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 MT-ND4P03905 459 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 MYL9P24844 172 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 CMC4P56277 68 aaPredicted RBP2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 ZNF33AQ06730 810 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 YIF1BQ5BJH7 314 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 FAM222AQ5U5X8 452 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 AGMATQ9BSE5 352 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 CHCHD7Q9BUK0 85 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 TOLLIPQ9H0E2 274 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 C8orf33Q9H7E9 229 aaPredicted RBP2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 CD209Q9NNX6 404 aa2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 FARSAQ9Y285 508 aaKnown RBP2.66□□□□□ -1.98
HMGCS1-207ENST00000514610 NCF1BA6NI72 391 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 NCF1CA8MVU1 366 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 BTNL10A8MVZ5 291 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 XRCC2O43543 280 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 PLIN3O60664 434 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 CTNSO60931 367 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 CYB5R3P00387 301 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 IGLV2-8P01709 118 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 GPR1P46091 355 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 CLDN8P56748 225 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 ATP6V0D1P61421 351 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 OPN5Q6U736 354 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 MDP1Q86V88 176 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 UNC93AQ86WB7 457 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 RAB43Q86YS6 212 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 CMTM8Q8IZV2 173 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 SLC35G3Q8N808 338 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 UBAC2Q8NBM4 344 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 INO80EQ8NBZ0 244 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 ITFG1Q8TB96 612 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 GPX8Q8TED1 209 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 PEX13Q92968 403 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 SCGB3A2Q96PL1 93 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 OR4K3Q96R72 315 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 KCNS3Q9BQ31 491 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 NUDT9Q9BW91 350 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 NAA50Q9GZZ1 169 aaKnown RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 DEFB129Q9H1M3 183 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 ZSCAN16Q9H4T2 348 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 MCUBQ9NWR8 336 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 RABL2AQ9UBK7 228 aaPredicted RBP2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 HES2Q9Y543 173 aa2.65□□□□□ -1.99
HMGCS1-207ENST00000514610 A0A0A6YYD5 115 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 IGHV1-3A0A0C4DH29 117 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 POLR1CO15160 346 aaPredicted RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 MPDU1O75352 247 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 TRBV12-3P01733 135 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 CATP04040 527 aaKnown RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 STAG3L3P0CL85 134 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 THRAP10827 490 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 MAGEA1P43355 309 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 DNAJC3Q13217 504 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 TFDP2Q14188 446 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 DMC1Q14565 340 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 PIP5KL1Q5T9C9 394 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 PLCXD3Q63HM9 321 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 KDM4DQ6B0I6 523 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 RWDD4Q6NW29 188 aaKnown RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 CD300LGQ6UXG3 332 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 LINC00336Q6ZUF6 198 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 TMCO2Q7Z6W1 182 aaPredicted RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 KIF2BQ8N4N8 673 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 DRAM1Q8N682 238 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 OR1L1Q8NH94 360 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 RERGQ96A58 199 aaPredicted RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 ZNF707Q96C28 371 aaPredicted RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 FAM19A4Q96LR4 140 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 ZFP3Q96NJ6 502 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 TEAD3Q99594 435 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 IQCGQ9H095 443 aaKnown RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 OR2AG1Q9H205 316 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 PLEKHF2Q9H8W4 249 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 FBXO8Q9NRD0 319 aa2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 DDX18Q9NVP1 670 aaKnown RBP2.64□□□□□ -1.99
HMGCS1-207ENST00000514610 CAB39Q9Y376 341 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms