RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 RNF144BQ7Z419 303 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 C1orf147Q96MC9 270 aaPredicted RBP13.04□□□□□ -0.32
VCAN-211ENST00000513984 SPACA5Q96QH8 159 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 SCPEP1Q9HB40 452 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 UPB1Q9UBR1 384 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 PIGLQ9Y2B2 252 aa13.04□□□□□ -0.32
VCAN-211ENST00000513984 MRPS28Q9Y2Q9 187 aaKnown RBP13.04□□□□□ -0.32
VCAN-211ENST00000513984 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
VCAN-211ENST00000513984 TRAV6A0A075B6T7 132 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 C7orf66A4D0T2 115 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 SCGNO76038 276 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 DHFRP00374 187 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 LCATP04180 440 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 CSF1P09603 554 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 AGTR1P30556 359 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 FOXG1P55316 489 aaPredicted RBP13.03□□□□□ -0.32
VCAN-211ENST00000513984 RAB25P57735 213 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 GUCA2AQ02747 115 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 MOGAT2Q3SYC2 334 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 PABPC1L2AQ5JQF8 200 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 ZNF100Q8IYN0 542 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 FAM46BQ96A09 425 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 REEP6Q96HR9 211 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 NUDT16L1Q9BRJ7 211 aaKnown RBP13.03□□□□□ -0.32
VCAN-211ENST00000513984 RGCCQ9H4X1 137 aa13.03□□□□□ -0.32
VCAN-211ENST00000513984 MYEF2Q9P2K5 600 aaKnown RBP13.03□□□□□ -0.32
VCAN-211ENST00000513984 RAB27BO00194 218 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 EFSO43281 561 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 LPLP06858 475 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 OR3A4PP47883 348 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 UBE2V2Q15819 145 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 PCGF3Q3KNV8 242 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 CRIP3Q6Q6R5 217 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 CDH24Q86UP0 819 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 SEMA6DQ8NFY4 1073 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 OR56B4Q8NH76 319 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 OR2AE1Q8NHA4 323 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 ITFG2Q969R8 447 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 SEH1LQ96EE3 360 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 ACTR6Q9GZN1 396 aa13.02□□□□□ -0.32
VCAN-211ENST00000513984 CACNA1GO43497 2377 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 LOC400499M0QZD8 3231 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 H2AFB2P0C5Z0 115 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 UBBP0CG47 229 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 COX5BP10606 129 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 PSMB1P20618 241 aaKnown RBP13.02□□□□□ -0.33
VCAN-211ENST00000513984 ACKR3P25106 362 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 FAUP35544 74 aaKnown RBP13.02□□□□□ -0.33
VCAN-211ENST00000513984 ALDH3B1P43353 468 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 GSK3AP49840 483 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 ACTBP60709 375 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 RRAS2P62070 204 aaPredicted RBP13.02□□□□□ -0.33
VCAN-211ENST00000513984 ACTG1P63261 375 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 FAPQ12884 760 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
VCAN-211ENST00000513984 C9orf135Q5VTT2 229 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 GLIPR1L1Q6UWM5 242 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 ACBD4Q8NC06 268 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 CPEB3Q8NE35 698 aaKnown RBP13.02□□□□□ -0.33
VCAN-211ENST00000513984 GAL3ST1Q99999 423 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 C20orf85Q9H1P6 137 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 B3GNT2Q9NY97 397 aa13.02□□□□□ -0.33
VCAN-211ENST00000513984 WIPF3A6NGB9 483 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 AQP7O14520 342 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 TNK1Q13470 666 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 KISS1Q15726 138 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 ZNF260Q3ZCT1 412 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 SFRP4Q6FHJ7 346 aaPredicted RBP13.01□□□□□ -0.33
VCAN-211ENST00000513984 FGD2Q7Z6J4 655 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 ZNF101Q8IZC7 436 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 PNLDC1Q8NA58 520 aaKnown RBP13.01□□□□□ -0.33
VCAN-211ENST00000513984 KCNG3Q8TAE7 436 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 AQP3Q92482 292 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
VCAN-211ENST00000513984 GMPPAQ96IJ6 420 aaPredicted RBP13.01□□□□□ -0.33
VCAN-211ENST00000513984 GPER1Q99527 375 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 C1QTNF5Q9BXJ0 243 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 GHITMQ9H3K2 345 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 CLCF1Q9UBD9 225 aa13.01□□□□□ -0.33
VCAN-211ENST00000513984 A0A096LPE4 126 aa13□□□□□ -0.33
VCAN-211ENST00000513984 A0A0A6YYJ9 748 aa13□□□□□ -0.33
VCAN-211ENST00000513984 hCG_38984A0A1B0GV85 526 aa13□□□□□ -0.33
VCAN-211ENST00000513984 A0A1W2PPZ6 126 aa13□□□□□ -0.33
VCAN-211ENST00000513984 XRCC2O43543 280 aa13□□□□□ -0.33
VCAN-211ENST00000513984 RIPPLY1Q0D2K3 151 aa13□□□□□ -0.33
VCAN-211ENST00000513984 GSG1Q2KHT4 349 aa13□□□□□ -0.33
VCAN-211ENST00000513984 IGFL3Q6UXB1 125 aa13□□□□□ -0.33
VCAN-211ENST00000513984 COLCA1Q6ZS62 124 aa13□□□□□ -0.33
VCAN-211ENST00000513984 OR4C16Q8NGL9 310 aa13□□□□□ -0.33
VCAN-211ENST00000513984 LPAR5Q9H1C0 372 aa13□□□□□ -0.33
VCAN-211ENST00000513984 PLSCR2Q9NRY7 297 aa13□□□□□ -0.33
VCAN-211ENST00000513984 GLRX2Q9NS18 164 aa13□□□□□ -0.33
VCAN-211ENST00000513984 GHRLQ9UBU3 117 aa13□□□□□ -0.33
VCAN-211ENST00000513984 PRSS50Q9UI38 385 aa13□□□□□ -0.33
VCAN-211ENST00000513984 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
VCAN-211ENST00000513984 ZNF503-AS2A6NEH8 195 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 A8MV72 311 aaPredicted RBP12.99□□□□□ -0.33
VCAN-211ENST00000513984 CDC14BO60729 498 aa12.99□□□□□ -0.33
VCAN-211ENST00000513984 SS18L1O75177 396 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms