RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 CA7P43166 264 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 VSNL1P62760 191 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PLCXD2Q0VAA5 305 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 KIAA0040Q15053 153 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ZNHIT3Q15649 155 aaPredicted RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 KRT71Q3SY84 523 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 SPIN4Q56A73 249 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PAN3Q58A45 887 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 HHATQ5VTY9 493 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ANKRD26P1Q6NSI1 321 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 SLC48A1Q6P1K1 146 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 XKRXQ6PP77 449 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ANGPTL8Q6UXH0 198 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TFAP2EQ6VUC0 442 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 RGS9BPQ6ZS82 235 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ZCCHC23Q6ZST2 131 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 LCA5Q86VQ0 697 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 C9orf40Q8IXQ3 194 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 FAM9CQ8IZT9 166 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 LRRC25Q8N386 305 aaPredicted RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 TMEM251Q8N6I4 163 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 FADS6Q8N9I5 356 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 STXBP6Q8NFX7 210 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 OR2T33Q8NG76 320 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 OR7G1Q8NGA0 311 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 OR10G3Q8NGC4 313 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 OR1J4Q8NGS1 313 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CLHC1Q8NHS4 586 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 FAM57AQ8TBR7 257 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 GPR151Q8TDV0 419 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 AENQ8WTP8 325 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 ADIPOR1Q96A54 375 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TSSK3Q96PN8 268 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ZNF382Q96SR6 550 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 KIR2DL4Q99706 377 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TM2D1Q9BX74 207 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PARD6BQ9BYG5 372 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TTTY12Q9BZ98 90 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 UCK2Q9BZX2 261 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ROPN1BQ9BZX4 212 aaPredicted RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 NXF5Q9H1B4 397 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 ANKRA2Q9H9E1 313 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 CXorf21Q9HAI6 301 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 LRTM1Q9HBL6 345 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 PALMDQ9NP74 551 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 KCNJ16Q9NPI9 418 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 MEPEQ9NQ76 525 aaPredicted RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 SDHAF3Q9NRP4 125 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TAS2R9Q9NYW1 312 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 SLC17A7Q9P2U7 560 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 B4GALT7Q9UBV7 327 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ZNF223Q9UK11 482 aaPredicted RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 CFL2Q9Y281 166 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 MEMO1Q9Y316 297 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 WDR45Q9Y484 360 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 TNRC6AQ8NDV7 1962 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 ZNF106Q9H2Y7 1883 aaKnown RBP3.17□□□□□ -1.9
HTT-210ENST00000512909 CACNA1GO43497 2377 aa3.17□□□□□ -1.9
HTT-210ENST00000512909 ACACAQ13085 2346 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 HCFC1P51610 2035 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 SCN3AQ9NY46 2000 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 A0A0G2JMM0 328 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 A0A1W2PPB8 328 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 A0A1W2PQ72 361 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 A0A1W2PRS3 328 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 NKX2-6A6NCS4 301 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 FRG2CA6NGY1 282 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ZSCAN5BA6NJL1 495 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 KIR3DP1A8MWS1 328 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 B4DXG7 233 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 UBFD1O14562 309 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 BCKDKO14874 412 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ICOSLGO75144 302 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ERLIN1O75477 346 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 UGT2B17O75795 530 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 SEMA3DO95025 777 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 SNX4O95219 450 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CPSF4O95639 269 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 OPN1LWP04000 364 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 PRPS2P11908 318 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 HPGDP15428 266 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 VDAC1P21796 283 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 DRD5P21918 477 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 IGHV1-2P23083 117 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ZBTB25P24278 435 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 GABRA3P34903 492 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 CHI3L1P36222 383 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 MAGEA12P43365 314 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 PPICP45877 212 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 STARP49675 285 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 TMED10P49755 219 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 TDGF1P3P51864 188 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 ARFIP1P53367 373 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 FOXA1P55317 472 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 NUP107P57740 925 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 DNAJB13P59910 316 aa3.16□□□□□ -1.9
HTT-210ENST00000512909 RPL38P63173 70 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 MRPS22P82650 360 aaKnown RBP3.16□□□□□ -1.9
HTT-210ENST00000512909 VLDLRP98155 873 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms