RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 H3BNH8 94 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DCTN6O00399 190 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PRMT5O14744 637 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 CFLARO15519 480 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 TAPBPO15533 448 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CTNSO60931 367 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 FOXH1O75593 365 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 LRATO95237 230 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 TNFAIP8O95379 198 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 TSPAN13O95857 204 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 P04436 131 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 MBL2P11226 248 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 XRCC1P18887 633 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 FUT3P21217 361 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 IGHV1-2P23083 117 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 ME2P23368 584 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DCKP27707 260 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 IFNA8P32881 189 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 HPCAL1P37235 193 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SLC1A1P43005 524 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CYB561P49447 251 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SGSHP51688 502 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 LSM6P62312 80 aaKnown RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 CDKL1Q00532 357 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 KLRB1Q12918 225 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DYNC1I2Q13409 638 aaKnown RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 TFDP1Q14186 410 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SMCO1Q147U7 214 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CD226Q15762 336 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 GCSAMLQ5JQS6 135 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SYPL2Q5VXT5 272 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 RESP18Q5W5W9 173 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 STEAP1BQ6NZ63 245 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DNM1P34Q6PK57 102 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CERS6Q6ZMG9 384 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 ADAMTSL5Q6ZMM2 481 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 COX15Q7KZN9 410 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 MOB1BQ7L9L4 216 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SSX6Q7RTT6 188 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PRSS48Q7RTY5 328 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 NT5DC3Q86UY8 548 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PLA2G4DQ86XP0 818 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 TMEM25Q86YD3 366 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 H1FOOQ8IZA3 346 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 STPG2Q8N412 459 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 RIBC1Q8N443 379 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 ZNF433Q8N7K0 673 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 OR52I1Q8NGK6 324 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 MCOLN3Q8TDD5 553 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 NEK7Q8TDX7 302 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CXorf40AQ8TE69 158 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 TFGQ92734 400 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 RORBQ92753 470 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PTH2Q96A98 100 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 UPRTQ96BW1 309 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 CMTM5Q96DZ9 223 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 SGTBQ96EQ0 304 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 CNN2Q99439 309 aaKnown RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 BCL2L14Q9BZR8 327 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DEFB129Q9H1M3 183 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 ASB7Q9H672 318 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PLEKHA1Q9HB21 404 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 PLGRKTQ9HBL7 147 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 NMRAL1Q9HBL8 299 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 XPNPEP1Q9NQW7 623 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 ZNF331Q9NQX6 463 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 INIPQ9NRY2 104 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 STARD5Q9NSY2 213 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 RMND1Q9NWS8 449 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 IL36GQ9NZH8 169 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 FBXL3Q9UKT7 428 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 C4AP0C0L4 1744 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 C4BP0C0L5 1744 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 COL24A1Q17RW2 1714 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 QSER1Q2KHR3 1735 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 ARAP2Q8WZ64 1704 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 KDM6AO15550 1401 aaPredicted RBP2.92□□□□□ -1.94
NUP54-209ENST00000510569 UBN2Q6ZU65 1347 aa2.92□□□□□ -1.94
NUP54-209ENST00000510569 DOCK2Q92608 1830 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TIAM2Q8IVF5 1701 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CARMIL3Q8ND23 1372 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 SLC22A20A6NK97 555 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 MIF4GDA9UHW6 222 aaKnown RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 C9J4A7 227 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 LAD1O00515 517 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 IMPA2O14732 288 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CASKO14936 926 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 SLC31A1O15431 190 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 FADS1O60427 444 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 RAMP3O60896 148 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 UGT2B17O75795 530 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 RCBTB2O95199 551 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 WISP3O95389 354 aaPredicted RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 TCRBP04435 133 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CDK1P06493 297 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 KLK1P06870 262 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 GSTA1P08263 222 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms