RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 HTR1FP30939 366 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 CD80P33681 288 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 SRP9P49458 86 aaKnown RBP11.38□□□□□ -0.59
SNF8-206ENST00000509989 BTG1P62324 171 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 CSNK2BP67870 215 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 OR8B8Q15620 311 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 ZNF684Q5T5D7 378 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 ZBTB49Q6ZSB9 765 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 GID4Q8IVV7 300 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 ENTHD1Q8IYW4 607 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 ZNF679Q8IYX0 411 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 GALNT4Q8N4A0 578 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 SEH1LQ96EE3 360 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 GAL3ST1Q99999 423 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 C9orf16Q9BUW7 83 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 PRRG3Q9BZD7 231 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 OR10A2Q9H208 303 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 G6PC2Q9NQR9 355 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 CLN6Q9NWW5 311 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 HAO2Q9NYQ3 351 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 KCNS2Q9ULS6 477 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 SLC22A13Q9Y226 551 aa11.38□□□□□ -0.59
SNF8-206ENST00000509989 FBN1P35555 2871 aaKnown RBP11.38□□□□□ -0.59
SNF8-206ENST00000509989 A6NIN4 97 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 RPP14O95059 124 aaKnown RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 IGLV3-1P01715 115 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 TFF1P04155 84 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 MSMBP08118 114 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 PEX2P28328 305 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 THBS2P35442 1172 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 PSMB10P40306 273 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 GATA4P43694 442 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 CDC42P60953 191 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 LCN2P80188 198 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 POU4F2Q12837 409 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 RCN1Q15293 331 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 LRRC28Q86X40 367 aaPredicted RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 BOLLQ8N9W6 283 aaKnown RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 DEFB108BQ8NET1 73 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 OR51E1Q8TCB6 317 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 APH1BQ8WW43 257 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 HPSE2Q8WWQ2 592 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 TIMD4Q96H15 378 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 FAM71F1Q96KD3 344 aaPredicted RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 TMEM246Q9BRR3 403 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 AMBNQ9NP70 447 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 GPR84Q9NQS5 396 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 MMP26Q9NRE1 261 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 FAM118AQ9NWS6 357 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 HIF1ANQ9NWT6 349 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 MRPL15Q9P015 296 aaKnown RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 WARS2Q9UGM6 360 aaKnown RBP11.37□□□□□ -0.59
SNF8-206ENST00000509989 ENOPH1Q9UHY7 261 aa11.37□□□□□ -0.59
SNF8-206ENST00000509989 IGHV3OR15-7A0A075B7D8 119 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 ZNF850A8MQ14 1090 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 CEACAM18A8MTB9 384 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 B4DSR2 109 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 ZNF670-ZNF695F2Z2N8 137 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 F5H0A9 414 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 TRAPPC2LH3BP13 241 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 J3QRE1 110 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 PHF1O43189 567 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 PTBP3O95758 552 aaKnown RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 DVL1P1P54792 670 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 SNRPGP62308 76 aaKnown RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 PRDX4Q13162 271 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 SMN1Q16637 294 aaKnown RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 ODF4Q2M2E3 257 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 CHRFAM7AQ494W8 412 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 SFRP4Q6FHJ7 346 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 KCTD18Q6PI47 426 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 FGFRL1Q8N441 504 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 OR10H4Q8NGA5 316 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 OR52H1Q8NGJ2 320 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 TMEM186Q96B77 213 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 RNFT2Q96EX2 444 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 MROQ9BYG7 248 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 NIPAL2Q9H841 368 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 PATZ1Q9HBE1 687 aaKnown RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 C1orf123Q9NWV4 160 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
SNF8-206ENST00000509989 GTF2A1LQ9UNN4 478 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 GMPPBQ9Y5P6 360 aa11.36□□□□□ -0.59
SNF8-206ENST00000509989 LOC100130705A0A1B0GUX0 176 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 A0A1B0GW55 424 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 ANKRD30BLA7E2S9 258 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 P2RY10O00398 339 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 GMDSO60547 372 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 APOC1P02654 83 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L2P0CJ85 424 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L3P0CJ86 424 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L4P0CJ87 422 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L5P0CJ88 424 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L6P0CJ89 424 aa11.35□□□□□ -0.59
SNF8-206ENST00000509989 DUX4L7P0CJ90 424 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms