RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 CASP9P55211 416 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ALKBH1Q13686 389 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 CIRBPQ14011 172 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 SLBPQ14493 270 aaKnown RBP eCLIP3.25□□□□□ -1.89
USP53-205ENST00000509769 SYPL1Q16563 259 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TIMM23BQ5SRD1 257 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SDHAF4Q5VUM1 108 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SLC8B1Q6J4K2 584 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF562Q6V9R5 426 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FCRLAQ7L513 359 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 VSIG10LQ86VR7 867 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NR2C2APQ86WQ0 139 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CBLN2Q8IUK8 224 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 H1FOOQ8IZA3 346 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 PRR18Q8N4B5 295 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TMEM116Q8NCL8 245 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 LGALS14Q8TCE9 139 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TMEM239Q8WW34 195 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 PIGCQ92535 297 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF707Q96C28 371 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 HARBI1Q96MB7 349 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MS4A4EQ96PG1 132 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FYTTD1Q96QD9 318 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 TSPAN32Q96QS1 320 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SERINC2Q96SA4 455 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ADAT1Q9BUB4 502 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 GGACTQ9BVM4 153 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 HCAR1Q9BXC0 346 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MS4A6AQ9H2W1 248 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MAP1LC3AQ9H492 121 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 EPHX3Q9H6B9 360 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF160Q9HCG1 818 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CYSLTR2Q9NS75 346 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MMACHCQ9Y4U1 282 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 KCNMB2Q9Y691 235 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 C2CD4BA6NLJ0 364 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NPIPB8E9PQR5 432 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TSPAN6O43657 245 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 OR1F1O43749 312 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NME2P1O60361 137 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SOCS5O75159 536 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NPIPB7O75200 414 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 VENTXO95231 258 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 S1PR4O95977 384 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 LCATP04180 440 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 GUSBP08236 651 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CD79AP11912 226 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 GDF5P43026 501 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 INSM1Q01101 510 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 EGR3Q06889 387 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 RAB32Q13637 225 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 IHHQ14623 411 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 RGNQ15493 299 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SGCAQ16586 387 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 HFEQ30201 348 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FBLN7Q53RD9 439 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MANEAQ5SRI9 462 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF684Q5T5D7 378 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 PIP5KL1Q5T9C9 394 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 PLPP4Q5VZY2 271 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NPNTQ6UXI9 565 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TCF24Q7RTU0 167 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 C9orf62Q8N4C0 152 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CDRT4Q8N9R6 151 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 OR6X1Q8NH79 312 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 RPS4Y2Q8TD47 263 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 RHBDD1Q8TEB9 315 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 DNAJC19Q96DA6 116 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MENTQ9BUN1 341 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 HINT2Q9BX68 163 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 BARHL1Q9BZE3 327 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 METTL7AQ9H8H3 244 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MTCH1Q9NZJ7 389 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 CLN8Q9UBY8 286 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TINAGQ9UJW2 476 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FLVCR1Q9Y5Y0 555 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 STYXL1Q9Y6J8 313 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FAM183AA6NL82 134 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 UNGP13051 313 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 RCC1P18754 421 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 SGSHP51688 502 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TNFRSF9Q07011 255 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 DLX2Q07687 328 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 SRSF6Q13247 344 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 LCN10Q6JVE6 187 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 PAQR6Q6TCH4 344 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ZNF322Q6U7Q0 402 aaPredicted RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 C1QL4Q86Z23 238 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MUC15Q8N387 334 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 OR10AG1Q8NH19 301 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 ARRDC2Q8TBH0 407 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 RNF133Q8WVZ7 376 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 FAM3DQ96BQ1 224 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 TMEM38AQ9H6F2 299 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SRD5A3Q9H8P0 318 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 WDR76Q9H967 626 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 SERTAD3Q9UJW9 196 aa3.25□□□□□ -1.89
USP53-205ENST00000509769 MRPS2Q9Y399 296 aaKnown RBP3.25□□□□□ -1.89
USP53-205ENST00000509769 A1L4Q6 167 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms