RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TRIM15Q9C019 465 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 CCDC134Q9H6E4 229 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 SIRT7Q9NRC8 400 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 MRPL15Q9P015 296 aaKnown RBP13.06□□□□□ -0.32
RAB40C-202ENST00000509637 SIGLEC9Q9Y336 463 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 N6AMT1Q9Y5N5 214 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 COMMD3-BMI1R4GMX3 469 aa13.06□□□□□ -0.32
RAB40C-202ENST00000509637 A6NLC8 198 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 ACOT8O14734 319 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 TIMM23O14925 209 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 GYPBP06028 91 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 NOS3P29474 1203 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 TGM4P49221 684 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 FAM3AP98173 230 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 SPIBQ01892 262 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 CDONQ4KMG0 1287 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 WDR82Q6UXN9 313 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 SLC37A3Q8NCC5 494 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 OR5T2Q8NGG2 359 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 LRRC29Q8WV35 223 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 AMELYQ99218 206 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 BTBD10Q9BSF8 475 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 GORASP2Q9H8Y8 452 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 ZNRD1Q9P1U0 126 aa13.05□□□□□ -0.32
RAB40C-202ENST00000509637 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 IDH3BO43837 385 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 TSPAN9O75954 239 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 PAX6P26367 422 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 RRM2P31350 389 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 RPL15P61313 204 aaKnown RBP13.04□□□□□ -0.32
RAB40C-202ENST00000509637 TSPAN31Q12999 210 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 LINC01590Q5TEZ4 76 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 ZNF770Q6IQ21 691 aaPredicted RBP13.04□□□□□ -0.32
RAB40C-202ENST00000509637 HCP5Q6MZN7 132 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 DRAM2Q6UX65 266 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 SLC16A9Q7RTY1 509 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 ZDHHC21Q8IVQ6 265 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 OR1M1Q8NGA1 313 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 OR9Q2Q8NGE9 314 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 OR4Q3Q8NH05 313 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 PPP1R35Q8TAP8 253 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 SLAMF6Q96DU3 332 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 KCNJ15Q99712 375 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 NMNAT2Q9BZQ4 307 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 SLC22A4Q9H015 551 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 WDR13Q9H1Z4 485 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 TCF7L1Q9HCS4 588 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 CD300AQ9UGN4 299 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 KPTNQ9Y664 436 aa13.04□□□□□ -0.32
RAB40C-202ENST00000509637 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 hCG_1807616A0A1W2PRN6 198 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 NDUFA2O43678 99 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 PRB2P02812 416 aaPredicted RBP13.03□□□□□ -0.32
RAB40C-202ENST00000509637 ZNF823P16415 610 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 PPP1R8Q12972 351 aaKnown RBP13.03□□□□□ -0.32
RAB40C-202ENST00000509637 SCCPDHQ8NBX0 429 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 GNPDA2Q8TDQ7 276 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 SPTSSAQ969W0 71 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 NSRP1Q9H0G5 558 aaKnown RBP13.03□□□□□ -0.32
RAB40C-202ENST00000509637 CENPMQ9NSP4 180 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 VNN3Q9NY84 501 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 KCNG2Q9UJ96 466 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 RHBDD3Q9Y3P4 386 aa13.03□□□□□ -0.32
RAB40C-202ENST00000509637 hCG_38984A0A1B0GV85 526 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 G3V4G9 280 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 ZNF593O00488 134 aaPredicted RBP13.02□□□□□ -0.33
RAB40C-202ENST00000509637 GASTP01350 101 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 EGR3Q06889 387 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 CRMP1Q14194 572 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 KCNJ8Q15842 424 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 BEAN1Q3B7T3 259 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 SLC35E4Q6ICL7 350 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
RAB40C-202ENST00000509637 PROKR2Q8NFJ6 384 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 COPS4Q9BT78 406 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 DCTN5Q9BTE1 182 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 TLNRD1Q9H1K6 362 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 RNPEPL1Q9HAU8 725 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 SNTG1Q9NSN8 517 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 IL20Q9NYY1 176 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 ONECUT1Q9UBC0 465 aa13.02□□□□□ -0.33
RAB40C-202ENST00000509637 PRPF19Q9UMS4 504 aaKnown RBP13.02□□□□□ -0.33
RAB40C-202ENST00000509637 SAMD4AQ9UPU9 718 aaKnown RBP13.02□□□□□ -0.33
RAB40C-202ENST00000509637 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 CDIPTO14735 213 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 ECDO95905 644 aaPredicted RBP13.01□□□□□ -0.33
RAB40C-202ENST00000509637 SPARCP09486 303 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 HMGA2P52926 109 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 KRT72Q14CN4 511 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 DGUOKQ16854 277 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 TEX30Q5JUR7 227 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 STUMQ69YW2 141 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 SPERTQ8NA61 448 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 C8orf46Q8TAG6 207 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 MED20Q9H944 212 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 VPREB3Q9UKI3 123 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 LYVE1Q9Y5Y7 322 aa13.01□□□□□ -0.33
RAB40C-202ENST00000509637 CDH10Q9Y6N8 788 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms