RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 GALK2Q01415 458 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 FHL3Q13643 280 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 TBC1D28Q2M2D7 210 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CCDC92Q53HC0 331 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 PABPC1L2AQ5JQF8 200 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ELFN2Q5R3F8 820 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 KRT80Q6KB66 452 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ADAM5Q6NVV9 412 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 UGT2A3Q6UWM9 527 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 DPY19L4Q7Z388 723 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 CDC20BQ86Y33 519 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ERI1Q8IV48 349 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC30A7Q8NEW0 376 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 BBS1Q8NFJ9 593 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR51L1Q8NGJ5 315 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR6N2Q8NGY6 317 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR1F12Q8NHA8 337 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 RNF133Q8WVZ7 376 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZMYND19Q96E35 227 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZC3HAV1LQ96H79 300 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ATF6BQ99941 703 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 TMEM204Q9BSN7 226 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 MROQ9BYG7 248 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 YTHDF1Q9BYJ9 559 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 BCL2L14Q9BZR8 327 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 WNT5BQ9H1J7 359 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 MED20Q9H944 212 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ELOVL3Q9HB03 270 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 ADGRL4Q9HBW9 690 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 RASSF1Q9NS23 344 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 DDX28Q9NUL7 540 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 SCN3BQ9NY72 215 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 EIF3KQ9UBQ5 218 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 LAMP5Q9UJQ1 280 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 BLOC1S6Q9UL45 172 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 EXOGQ9Y2C4 368 aaKnown RBP4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 LHFPL6Q9Y693 200 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 HECTD1Q9ULT8 2610 aa4.73□□□□□ -1.65
HMGB1P44-201ENST00000508597 DSCAMO60469 2012 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 UNC79Q9P2D8 2635 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 IGHV1-18A0A0C4DH31 117 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DPRXA6NFQ7 191 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DEFB108AA8MXU0 73 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF670-ZNF695F2Z2N8 137 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 J3QRE1 110 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 M0R1B8 84 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 RER1O15258 196 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 MRPS14O60783 128 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 SULT1C4O75897 302 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 CHRM2P08172 466 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 IL6RP08887 468 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 SPARCP09486 303 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 TACSTD2P09758 323 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 PATE4P0C8F1 98 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DBTP11182 482 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF35P13682 527 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 OTX1P32242 354 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 GLRXP35754 106 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 LIPAP38571 399 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 HTR5AP47898 357 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF83P51522 516 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 IDH3GP51553 393 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACTA2P62736 377 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACTG2P63267 376 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 NAAAQ02083 359 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 TLE4Q04727 773 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF91Q05481 1191 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 MRPL28Q13084 256 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 EIF2B1Q14232 305 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 TAF13Q15543 124 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 MOGQ16653 247 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 MEP1BQ16820 701 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 KRTAP27-1Q3LI81 207 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 RBM48Q5RL73 367 aaKnown RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 C6orf141Q5SZD1 244 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 C6orf52Q5T4I8 152 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 RNLSQ5VYX0 342 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF774Q6NX45 483 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF544Q6NX49 715 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DRAM2Q6UX65 266 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 PLEKHG7Q6ZR37 379 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 DCXRQ7Z4W1 244 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLC35F2Q8IXU6 374 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNF679Q8IYX0 411 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ACBD7Q8N6N7 88 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 NUP37Q8NFH4 326 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR51G2Q8NGK0 314 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 OR5L1Q8NGL2 311 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 FGFBP3Q8TAT2 258 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ST7LQ8TDW4 575 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 APH1BQ8WW43 257 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ZNRF4Q8WWF5 429 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 TRIM63Q969Q1 353 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 APOBEC3DQ96AK3 386 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 SLAMF6Q96DU3 332 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 RNFT2Q96EX2 444 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 POM121L2Q96KW2 1035 aa4.72□□□□□ -1.65
HMGB1P44-201ENST00000508597 ABHD6Q9BV23 337 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms