RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SLC39A11Q8N1S5 342 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 HSD17B8Q92506 261 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RAB40CQ96S21 281 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SLCO1C1Q9NYB5 712 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TREM2Q9NZC2 230 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RARRES3Q9UL19 164 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 MED16Q9Y2X0 877 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RGPD8O14715 1765 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TRBV5-3A0A0A0MS03 114 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TEX50A0A1B0GTY4 177 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF207O43670 478 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 DOK2O60496 412 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 PRAMEF4O60810 478 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 OR10J4P0C629 311 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CD79AP11912 226 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 NTSR1P30989 418 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CLDN17P56750 224 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM33P57088 247 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CLEC12BQ2HXU8 276 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 PWWP2BQ6NUJ5 590 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 FAM181AQ8N9Y4 354 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 NUBPLQ8TB37 319 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 MR1Q95460 341 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 IL22RA2Q969J5 263 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 MRPS24Q96EL2 167 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SNX22Q96L94 193 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SFXN1Q9H9B4 322 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CACNA1SQ13698 1873 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 A0A1W2PPE2 198 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 PRSS38A1L453 326 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 M0R1X1 148 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ZIC2O95409 532 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ETHE1O95571 254 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 NRASP01111 189 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 HRASP01112 189 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 KRASP01116 189 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 OR5AC1P0C628 307 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 MSX1P28360 303 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 P2RY2P41231 377 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 EIF1P41567 113 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CARD18P57730 90 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TAS2R60P59551 318 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RPL18Q07020 188 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 INSL4Q14641 139 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 GUCA2BQ16661 112 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 NKAIN2Q5VXU1 208 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 DHRS7BQ6IAN0 325 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RTL10Q7L3V2 364 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 PBOV1Q9GZY1 135 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TXNIPQ9H3M7 391 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SLC22A13Q9Y226 551 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SIGLEC7Q9Y286 467 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 FCMRO60667 390 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF865P0CJ78 1059 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 TBXA2RP21731 343 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 GCH1P30793 250 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 APOBEC1P41238 236 aaKnown RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 CDX1P47902 265 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ACKR1Q16570 336 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 THEM4Q5T1C6 240 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF660Q6AZW8 331 aaPredicted RBP6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 RFLNAQ6ZTI6 216 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 USP53Q70EK8 1073 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 DEFB132Q7Z7B7 95 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ZNF738Q8NE65 137 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 OR51H1Q8NH63 302 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 OTOSQ8NHW6 89 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 LAT2Q9GZY6 243 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 AKAP11Q9UKA4 1901 aa6.61□□□□□ -1.35
UBE2D3-224ENST00000508474 SOCS7O14512 581 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ARPC3O15145 178 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 MPPED1O15442 326 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PAFAH1B2P68402 229 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 TMEM52BQ4KMG9 183 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DRAM2Q6UX65 266 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DPPA3Q6W0C5 159 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 RABEPKQ7Z6M1 372 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DDX60Q8IY21 1712 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LIPHQ8WWY8 451 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 MCHR2Q969V1 340 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 CCDC74BQ96LY2 380 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 KIF13AQ9H1H9 1805 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 DAPP1Q9UN19 280 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 KCNE1BA0A087WTH5 132 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 A0A1W2PNV4 684 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 H3BQ15 152 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PLRG1O43660 514 aaKnown RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ADAM11O75078 769 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZFAND5O76080 213 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 ZFPL1O95159 310 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 IL24Q13007 206 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 GPM6BQ13491 265 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 AGERQ15109 404 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 PRR27Q6MZM9 219 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LSRQ86X29 649 aaPredicted RBP6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LDLRAD3Q86YD5 345 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 LRRC18Q8N456 261 aa6.6□□□□□ -1.35
UBE2D3-224ENST00000508474 OR2C3Q8N628 320 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms