RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 LRRC57Q8N9N7 239 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR52M1Q8NGK5 317 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NANPQ8TBE9 248 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM158Q8WZ71 300 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CSF3RQ99062 836 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NPAS1Q99742 590 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PCGF1Q9BSM1 259 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IKZF5Q9H5V7 419 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 EVA1AQ9H8M9 152 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ACOXLQ9NUZ1 547 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PIEZO1Q92508 2521 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PSMG1O95456 288 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CR2P20023 1033 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SUMO3P55854 103 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 LSM11P83369 360 aaKnown RBP eCLIP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TNFAIP6P98066 277 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SNTB2Q13425 540 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SYT6Q5T7P8 510 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DGAT2L7PQ6IED9 249 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ACSM5Q6NUN0 579 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DHRS4L2Q6PKH6 230 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IL34Q6ZMJ4 242 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 Q6ZNX1 250 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 Q6ZRG5 221 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MS4A15Q8N5U1 240 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM239Q8WW34 195 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TM4SF19Q96DZ7 209 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MRGPRX4Q96LA9 322 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 STACQ99469 402 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PKP2Q99959 881 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 C20orf24Q9BUV8 137 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PBDC1Q9BVG4 233 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 EIF5A2Q9GZV4 153 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MS4A5Q9H3V2 200 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PTTG2Q9NZH5 202 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 KIF25Q9UIL4 384 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 KCNK7Q9Y2U2 307 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SHANK1Q9Y566 2161 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ZFYVE26Q68DK2 2539 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PLXNB3Q9ULL4 1909 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TRGV10A0A0A0MS01 117 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IGHV3-64DA0A0J9YX35 117 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 H3BMQ9 156 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 M0R233 179 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DVL1O14640 695 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SGCEO43556 437 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 FGF17O60258 216 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SNX3O60493 162 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 HMGN2P05204 90 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR10J4P0C629 311 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR8G3PP0DMU2 310 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CDKN2CP42773 168 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 LGALS7P47929 136 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DVL1P1P54792 670 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PRRX1P54821 245 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 GSG1Q2KHT4 349 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CTU2Q2VPK5 515 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 COQ5Q5HYK3 327 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CLVS2Q5SYC1 327 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 VRK2Q86Y07 508 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NRMQ8IXM6 262 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM251Q8N6I4 163 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR5R1Q8NH85 324 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SMAP2Q8WU79 429 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 RASD2Q96D21 266 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM19Q96HH6 336 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SLC35E1Q96K37 410 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF778Q96MU6 729 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR4C12Q96R67 309 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 RASL10BQ96S79 203 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CACNG6Q9BXT2 260 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CRIM1Q9NZV1 1036 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TRAV36DV7A0A075B6V5 113 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MEIKINA0A087WXM9 373 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 EDF1O60869 148 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CTSVO60911 334 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MED6O75586 246 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 EFEMP2O95967 443 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 DRD5P21918 477 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PPP1R8Q12972 351 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM177Q53S58 311 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 AVPI1Q5T686 147 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PRAMEF9Q5VWM5 478 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 GSG1LQ6UXU4 331 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SSX9Q7RTT3 188 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 IGDCC3Q8IVU1 814 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CYB561A3Q8NBI2 242 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR1J1Q8NGS3 322 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 OR6K3Q8NGY3 331 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 C16orf52Q8NHV5 167 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 MAFIPQ8WZ33 124 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SNAPC3Q92966 411 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 FOXRED1Q96CU9 486 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 FYTTD1Q96QD9 318 aaKnown RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 PCDHAC1Q9H158 963 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 SPACA1Q9HBV2 294 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 CYSLTR2Q9NS75 346 aa2.64□□□□□ -1.99
NEDD4-208ENST00000508342 BEX4Q9NWD9 120 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 NKX1-2Q9UD57 310 aaPredicted RBP2.64□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF629Q9UEG4 869 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms