RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 SMIM19Q96E16 107 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 HIST1H2AAQ96QV6 131 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 EGLN1Q9GZT9 426 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 BARX1Q9HBU1 254 aaPredicted RBP17.17■□□□□ 0.34
USP53-203ENST00000507597 NEK6Q9HC98 313 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 NKIRAS2Q9NYR9 191 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 ENPP5Q9UJA9 477 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 MAST4O15021 2626 aa17.17■□□□□ 0.34
USP53-203ENST00000507597 A0A087WXM4 84 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 C17orf100A8MU93 164 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 P2RY10O00398 339 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 GMDSO60547 372 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 IGLV3-1P01715 115 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 ADRA2AP08913 450 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 CD53P19397 219 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 ALDH3B1P43353 468 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 CDH15P55291 814 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 GPR50Q13585 617 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 MSMPQ1L6U9 139 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 ZNF367Q7RTV3 350 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 OR56B2PQ8NGI1 322 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 UFD1Q92890 307 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 DECR2Q9NUI1 292 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 MPC1Q9Y5U8 109 aa17.16■□□□□ 0.34
USP53-203ENST00000507597 RTTNQ86VV8 2226 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 ZNF816-ZNF321PA0A0X1KG74 233 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 ANXA2P2A6NMY6 339 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 OR4C45A6NMZ5 311 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 OVOL3O00110 214 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 CCL1P22362 96 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 MMP15P51511 669 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 NANOS3P60323 173 aaKnown RBP17.15■□□□□ 0.34
USP53-203ENST00000507597 KRTAP10-9P60411 292 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 ODF4Q2M2E3 257 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 CDH24Q86UP0 819 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 MS4A15Q8N5U1 240 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 PLPP7Q8NBV4 271 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 ZNF485Q8NCK3 441 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 GPR148Q8TDV2 347 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 PPP1R14AQ96A00 147 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 MBD6Q96DN6 1003 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 SLC30A2Q9BRI3 323 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 MYEF2Q9P2K5 600 aaKnown RBP17.15■□□□□ 0.34
USP53-203ENST00000507597 PLEKHA6Q9Y2H5 1048 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 ZNF281Q9Y2X9 895 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 HECTD1Q9ULT8 2610 aa17.15■□□□□ 0.34
USP53-203ENST00000507597 LOC107986453A0A1B0GWG9 222 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 TPD52L2O43399 206 aaKnown RBP17.14■□□□□ 0.33
USP53-203ENST00000507597 PLPP2O43688 288 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 CD2P06729 351 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 ADH4P08319 380 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 HSMCR30P0CW71 290 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 CELP19835 753 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 KIR3DL2P43630 455 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 SLC3A1Q07837 685 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 MLLT11Q13015 90 aaPredicted RBP17.14■□□□□ 0.33
USP53-203ENST00000507597 OR8G1Q15617 311 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 TRAM1Q15629 374 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 ALKBH6Q3KRA9 238 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 YIF1BQ5BJH7 314 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 Q6ZSR3 168 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 SPARTQ8N0X7 666 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 BHLHE23Q8NDY6 225 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 TSPAN14Q8NG11 270 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 SGCDQ92629 289 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 LYZL4Q96KX0 146 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 ZNF696Q9H7X3 374 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 ACOT13Q9NPJ3 140 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 PIGLQ9Y2B2 252 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 V9GYS6 101 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 NAV2Q8IVL1 2488 aa17.14■□□□□ 0.33
USP53-203ENST00000507597 A0A1B0GTI1 187 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 E9PI62 339 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 SPRY3O43610 288 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 ZFPL1O95159 310 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 CST4P01036 141 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 NAT2P11245 290 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 PAX1P15863 534 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 ZNF20P17024 532 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 TNFRSF1AP19438 455 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 SRP9P49458 86 aaKnown RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 GTF2A1P52655 376 aaPredicted RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 EMX1Q04741 257 aaPredicted RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 DMKNQ6E0U4 476 aaPredicted RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 LRRC75A-AS1Q8N1F1 130 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 OR2Z1Q8NG97 314 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 OR13C3Q8NGS6 347 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 OR14K1Q8NGZ2 314 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 OR8S1Q8NH09 359 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 TSEN15Q8WW01 171 aaKnown RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 PP6455Q8WZ26 134 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 ELMOD3Q96FG2 381 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 TECTBQ96PL2 329 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 MGLLQ99685 303 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 PAPOLGQ9BWT3 736 aaKnown RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 LIME1Q9H400 295 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 ZNF701Q9NV72 531 aaPredicted RBP17.13■□□□□ 0.33
USP53-203ENST00000507597 C14orf119Q9NWQ9 140 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 IL19Q9UHD0 177 aa17.13■□□□□ 0.33
USP53-203ENST00000507597 DHDHQ9UQ10 334 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms