RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CBLL1Q75N03 491 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.38□□□□□ -0.27
SNF8-205ENST00000507302 DTX3Q8N9I9 347 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 OR4S1Q8NGB4 309 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 C17orf50Q8WW18 174 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 SGCDQ92629 289 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 SSX3Q99909 188 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 SIKE1Q9BRV8 207 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 FUZQ9BT04 418 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 MMP28Q9H239 520 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 OPA3Q9H6K4 179 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 METTL8Q9H825 291 aaKnown RBP13.38□□□□□ -0.27
SNF8-205ENST00000507302 SRA1Q9HD15 236 aaKnown RBP13.38□□□□□ -0.27
SNF8-205ENST00000507302 ADA2Q9NZK5 511 aa13.38□□□□□ -0.27
SNF8-205ENST00000507302 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.37□□□□□ -0.27
SNF8-205ENST00000507302 GGT3PA6NGU5 568 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 A6NLC8 198 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 DDOSTP39656 456 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 IFI44LQ53G44 452 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 FOXB2Q5VYV0 432 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 LIAT1Q6ZQX7 453 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 RRM2BQ7LG56 351 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 NDUFA11Q86Y39 141 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 OR2AJ1Q8NGZ0 328 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 PIFOQ8TCI5 191 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 LRRC29Q8WV35 223 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 SPTSSAQ969W0 71 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 ITPKCQ96DU7 683 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 NMNAT3Q96T66 252 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 RAB18Q9NP72 206 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 SERTAD4Q9NUC0 356 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
SNF8-205ENST00000507302 A0A1W2PRD5 423 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 A0A1W2PRF3 423 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 A0A1W2PRM7 423 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 hCG_1807616A0A1W2PRN6 198 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 MRASO14807 208 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 NDUFB3O43676 98 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 CHST1O43916 411 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 NOS3P29474 1203 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 GRK5P34947 590 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 CENPAP49450 140 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 LRRC75BQ2VPJ9 315 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 LRRC10Q5BKY1 277 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 ZNF788Q6ZQV5 615 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 OR1M1Q8NGA1 313 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 SEH1LQ96EE3 360 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 DHRS1Q96LJ7 313 aa13.36□□□□□ -0.27
SNF8-205ENST00000507302 OR6C68A6NDL8 312 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 UNC119BA6NIH7 251 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 K7EIL1 84 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 TIPRLO75663 272 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 VSIG8P0DPA2 414 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 HIST1H1CP16403 213 aaKnown RBP13.35□□□□□ -0.27
SNF8-205ENST00000507302 CAV3P56539 151 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 SEC23BQ15437 767 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 C11orf87Q6NUJ2 197 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 PAPD5Q8NDF8 572 aaKnown RBP13.35□□□□□ -0.27
SNF8-205ENST00000507302 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 HSH2DQ96JZ2 352 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 ERMAPQ96PL5 475 aaPredicted RBP13.35□□□□□ -0.27
SNF8-205ENST00000507302 OR4F4Q96R69 305 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 DDOQ99489 341 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 ZNF702PQ9H963 129 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 RPRD1BQ9NQG5 326 aaKnown RBP13.35□□□□□ -0.27
SNF8-205ENST00000507302 MRGBPQ9NV56 204 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 CMTM6Q9NX76 183 aa13.35□□□□□ -0.27
SNF8-205ENST00000507302 GMPR2Q9P2T1 348 aaKnown RBP13.35□□□□□ -0.27
SNF8-205ENST00000507302 EDF1O60869 148 aaKnown RBP13.34□□□□□ -0.27
SNF8-205ENST00000507302 FBXO24O75426 580 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 RENP00797 406 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 H1F0P07305 194 aaKnown RBP13.34□□□□□ -0.27
SNF8-205ENST00000507302 CD28P10747 220 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 PSKH1P11801 424 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 SELLP14151 372 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 MXRA7P84157 204 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 KLF10Q13118 480 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 RORBQ92753 470 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
SNF8-205ENST00000507302 NPFFR1Q9GZQ6 430 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 WNT10AQ9GZT5 417 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 GID8Q9NWU2 228 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 HAO2Q9NYQ3 351 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 AP3M1Q9Y2T2 418 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
SNF8-205ENST00000507302 CAPN7Q9Y6W3 813 aa13.34□□□□□ -0.27
SNF8-205ENST00000507302 TRBV4-1A0A0J9YWV2 114 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 CXCR6O00574 342 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 XRCC2O43543 280 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 IDH3BO43837 385 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 ZNF682O95780 498 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 VSIG10L2P0DP72 767 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 NAA10P41227 235 aaPredicted RBP13.33□□□□□ -0.28
SNF8-205ENST00000507302 CSNK2BP67870 215 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 FAM3AP98173 230 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 IKZF1Q13422 519 aa13.33□□□□□ -0.28
SNF8-205ENST00000507302 LY6EQ16553 131 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms