RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 LILRA1O75019 489 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 GOSR1O95249 250 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 KITLGP21583 273 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 GADD45AP24522 165 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 GCH1P30793 250 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 CRYBB2P43320 205 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 SOX2P48431 317 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 GPR141Q7Z602 305 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 OR5AS1Q8N127 324 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 MS4A15Q8N5U1 240 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 SYNPRQ8TBG9 265 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 TSEN15Q8WW01 171 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 MRPL24Q96A35 216 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 ORAI1Q96D31 301 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 SYT3Q9BQG1 590 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 FUNDC2Q9BWH2 189 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 NAA50Q9GZZ1 169 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 PLEKHB1Q9UF11 243 aaPredicted RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 PURGQ9UJV8 347 aaKnown RBP12.15□□□□□ -0.46
RNF4-208ENST00000507247 CMAHPQ9Y471 501 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 MAST4O15021 2626 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
RNF4-208ENST00000507247 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 IGLV3-9A0A075B6K5 115 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 IQCF6A8MYZ5 107 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 ZNF879B4DU55 563 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 PIN1P1O15428 100 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 MTRF1O75570 445 aaKnown RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 GPX5O75715 221 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 RGS9O75916 674 aaPredicted RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 OR4A8P0C604 315 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 OCM2P0CE71 109 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 FAHP16930 419 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 MAP2K3P46734 347 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 TRAM1Q15629 374 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 Q499Y3 187 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 ACSM3Q53FZ2 586 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 FAM27D1Q5T7N8 215 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 ASPHD2Q6ICH7 369 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 CD200R1LQ6Q8B3 271 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 ZNF295-AS1Q8N0V1 137 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 BHLHE23Q8NDY6 225 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 RPL3LQ92901 407 aaKnown RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 ADAT3Q96EY9 351 aaPredicted RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 PPP1R3EQ9H7J1 279 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
RNF4-208ENST00000507247 STUB1Q9UNE7 303 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 DHDHQ9UQ10 334 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 PIGLQ9Y2B2 252 aa12.14□□□□□ -0.47
RNF4-208ENST00000507247 TRBV5-7A0A0A0MS05 114 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 TRDV1A0A1B0GX56 115 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 A0A1W2PPK0 400 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 DHRS7CA6NNS2 312 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 CTAG2O75638 210 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 IGHV3-13P01766 116 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 HLA-DPB1P04440 258 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 ZNF12P17014 697 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 PSMA1P25786 263 aaKnown RBP12.13□□□□□ -0.47
RNF4-208ENST00000507247 APOBEC3AP31941 199 aaPredicted RBP12.13□□□□□ -0.47
RNF4-208ENST00000507247 KLF3P57682 345 aaPredicted RBP12.13□□□□□ -0.47
RNF4-208ENST00000507247 RIPPLY1Q0D2K3 151 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 ZMAT1Q5H9K5 638 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 SLC16A12Q6ZSM3 486 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 CCDC54Q8NEL0 328 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
RNF4-208ENST00000507247 TMEM106AQ96A25 262 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 FGGYQ96C11 551 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 DERL3Q96Q80 235 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 DUSP13Q9UII6 198 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 RHBDD3Q9Y3P4 386 aa12.13□□□□□ -0.47
RNF4-208ENST00000507247 ABCA4P78363 2273 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 HS3ST1O14792 307 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 TIMM8AO60220 97 aaPredicted RBP12.12□□□□□ -0.47
RNF4-208ENST00000507247 SERPINA3P01011 423 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 SELEP16581 610 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 DDOSTP39656 456 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 GPR107Q5VW38 600 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 CEACAM19Q7Z692 300 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 CSNK2A3Q8NEV1 391 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 UBASH3BQ8TF42 649 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 FBXW5Q969U6 566 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 CHCHD6Q9BRQ6 235 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 PLK3Q9H4B4 646 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 RNF167Q9H6Y7 350 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 PLEKHA1Q9HB21 404 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 EXOSC4Q9NPD3 245 aaKnown RBP12.12□□□□□ -0.47
RNF4-208ENST00000507247 NOX4Q9NPH5 578 aa12.12□□□□□ -0.47
RNF4-208ENST00000507247 TXNL4BQ9NX01 149 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms