RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ANKRD65E5RJM6 399 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 LOC110117498-PIK3R3F6TDL0 507 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 SLC16A6O15403 523 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 ENTPD6O75354 484 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 CDH15P55291 814 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 BTG1P62324 171 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 SPRNQ5BIV9 151 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 BCL2L15Q5TBC7 163 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 MUC20Q8N307 709 aaPredicted RBP14.09□□□□□ -0.15
SNCA-209ENST00000506244 RFLNBQ8N5W9 214 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 PLPP7Q8NBV4 271 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 OR8S1Q8NH09 359 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 MRPL48Q96GC5 212 aaKnown RBP14.09□□□□□ -0.15
SNCA-209ENST00000506244 C1orf159Q96HA4 380 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 TBX5Q99593 518 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 PAPOLGQ9BWT3 736 aaKnown RBP14.09□□□□□ -0.15
SNCA-209ENST00000506244 PBOV1Q9GZY1 135 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 ZNF665Q9H7R5 613 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 FN3KRPQ9HA64 309 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 GTF2A1LQ9UNN4 478 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 R4GMQ9 66 aa14.09□□□□□ -0.15
SNCA-209ENST00000506244 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNCA-209ENST00000506244 A0A1W2PQL4 384 aaPredicted RBP14.08□□□□□ -0.16
SNCA-209ENST00000506244 ERICH4A6NGS2 130 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 ANXA2P2A6NMY6 339 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 PRR32B1ATL7 298 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 SULT1C4O75897 302 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 TGFAP01135 160 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 ATP6V1B1P15313 513 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 PEX2P28328 305 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 IL2RGP31785 369 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 IL5RAQ01344 420 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 LRRC36Q1X8D7 754 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 TMEM155Q4W5P6 130 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 PLEKHG7Q6ZR37 379 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 MOGAT3Q86VF5 341 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 ENTHD1Q8IYW4 607 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 GALNT4Q8N4A0 578 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 YIPF7Q8N8F6 280 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 Q8TCH9 128 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 RNFT2Q96EX2 444 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 DCLRE1BQ9H816 532 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 ZNF319Q9P2F9 582 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 LPAR3Q9UBY5 353 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 SNX5Q9Y5X3 404 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 DYSFO75923 2080 aa14.08□□□□□ -0.16
SNCA-209ENST00000506244 YLPM1P49750 1951 aaKnown RBP14.07□□□□□ -0.16
SNCA-209ENST00000506244 METTL15A6NJ78 407 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 TMEM178BH3BS89 294 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 LMX1BO60663 402 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 MTRF1O75570 445 aaKnown RBP14.07□□□□□ -0.16
SNCA-209ENST00000506244 APOL3O95236 402 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 PTBP3O95758 552 aaKnown RBP14.07□□□□□ -0.16
SNCA-209ENST00000506244 IGHV2-70P01814 119 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 HNF1AP20823 631 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 MDH2P40926 338 aaKnown RBP14.07□□□□□ -0.16
SNCA-209ENST00000506244 MAP2K3P46734 347 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 MAB21L1Q13394 359 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 TTC23Q5W5X9 447 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 GLCCI1Q86VQ1 547 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 KLHL36Q8N4N3 616 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 OR51F2Q8NH61 342 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 RHOXF1Q8NHV9 184 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 UBE2FQ969M7 185 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 SIGLEC11Q96RL6 698 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 MRM2Q9UI43 246 aaKnown RBP14.07□□□□□ -0.16
SNCA-209ENST00000506244 CDC42EP3Q9UKI2 254 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 MPC1Q9Y5U8 109 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 ZFHX3Q15911 3703 aa14.07□□□□□ -0.16
SNCA-209ENST00000506244 SETD2Q9BYW2 2564 aaPredicted RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 ZNF816-ZNF321PA0A0X1KG74 233 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 WNT9BO14905 357 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 CASQ2O14958 399 aaPredicted RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 FSTL3O95633 263 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 IGHV2-5P01817 119 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 GABRB1P18505 474 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 LMO4P61968 165 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 ACTA2P62736 377 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 ACTG2P63267 376 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 ZNF91Q05481 1191 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 MFGE8Q08431 387 aaPredicted RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 ZBTB37Q5TC79 503 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 LPCAT4Q643R3 524 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 SETD9Q8NE22 299 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 DVL3Q92997 716 aaPredicted RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 MICU1Q9BPX6 476 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 RTL8AQ9BWD3 113 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 UBAP1Q9NZ09 502 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 PCDHB10Q9UN67 800 aa14.06□□□□□ -0.16
SNCA-209ENST00000506244 FN1P02751 2386 aaKnown RBP14.06□□□□□ -0.16
SNCA-209ENST00000506244 DAPL1A0PJW8 107 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 A6NLC8 198 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 CRLF1O75462 422 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 SRSF10O75494 262 aaKnown RBP14.05□□□□□ -0.16
SNCA-209ENST00000506244 CST4P01036 141 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 MSMBP08118 114 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 DBTP11182 482 aaKnown RBP14.05□□□□□ -0.16
SNCA-209ENST00000506244 CPT2P23786 658 aa14.05□□□□□ -0.16
SNCA-209ENST00000506244 DVL1P1P54792 670 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms