RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 S100ZQ8WXG8 99 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 FBXO17Q96EF6 278 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SPATA25Q9BR10 227 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 TTYH2Q9BSA4 534 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SPATA2Q9UM82 520 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 LOC100509620A0A075B734 347 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 C7orf66A4D0T2 115 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 HSPB2A8KAH6 182 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 A8MVM7 634 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 F5H697 171 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 PRYO14603 147 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SSX5O60225 188 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 HMGN1P05114 100 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 CXCL3P19876 107 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 RBMXP38159 391 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 GDI2P50395 445 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 HSPB2Q16082 182 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 CLPPQ16740 277 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ZSWIM7Q19AV6 140 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 METAP1DQ6UB28 335 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF584Q8IVC4 421 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 MDS2Q8NDY4 140 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 UFD1Q92890 307 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ADAT3Q96EY9 351 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 GNRHR2Q96P88 292 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 PELOQ9BRX2 385 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 OR51V1Q9H2C8 321 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 LIME1Q9H400 295 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 CHTOPQ9Y3Y2 248 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 MED12LQ86YW9 2145 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 A0A0J9YW62 118 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 A1L4Q6 167 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 IFITM5A6NNB3 132 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF879B4DU55 563 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SLC6A6P31641 620 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 MMP15P51511 669 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 NKX2-5P52952 324 aaPredicted RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 PRPS1P60891 318 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SNTB2Q13425 540 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 KRR1Q13601 381 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ANGPT1Q15389 498 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 RGS21Q2M5E4 152 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 PRR31Q5SQ13 230 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 DPY19L4Q7Z388 723 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 LDLRAD3Q86YD5 345 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 DND1Q8IYX4 353 aaKnown RBP5.11□□□□□ -1.59
SCLT1-207ENST00000506233 OR52L2PQ8NGH6 319 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 CT55Q8WUE5 264 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ART5Q96L15 291 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 OR2M2Q96R28 347 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 TPK1Q9H3S4 243 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 PISDQ9UG56 409 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 OTOGLQ3ZCN5 2332 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 ANK2Q01484 3957 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 GPR179Q6PRD1 2367 aa5.11□□□□□ -1.59
SCLT1-207ENST00000506233 SEC16AO15027 2179 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 BLOC1S5-TXNDC5H3BN57 136 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 J3QLW9 94 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 AP4M1O00189 453 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ORC5O43913 435 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 SCGB2A1O75556 95 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 AQP8O94778 261 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 SAGP10523 405 aaPredicted RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF19P17023 458 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 PSMA1P25786 263 aaKnown RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 PLCXD2Q0VAA5 305 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 SLC22A6Q4U2R8 563 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 GAGE13Q4V321 117 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 C10orf128Q5T292 105 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ATAD3CQ5T2N8 411 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 DCAF12L2Q5VW00 463 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 RPL22L1Q6P5R6 122 aaKnown RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 PAMR1Q6UXH9 720 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 OR4D6Q8NGJ1 314 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 AKR7LQ8NHP1 331 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 KCTD7Q96MP8 289 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 CNN2Q99439 309 aaKnown RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 COQ7Q99807 217 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 C6orf62Q9GZU0 229 aaPredicted RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ARRDC1-AS1Q9H2J1 176 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 NIPAL2Q9H841 368 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 KLHL28Q9NXS3 571 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 MYO7BQ6PIF6 2116 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 FAM90A10PA6NDY2 464 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 SCO2O43819 266 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 PTBP1P26599 531 aaKnown RBP eCLIP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 LHX2P50458 406 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ANXA11P50995 505 aaKnown RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 KCNJ8Q15842 424 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ATP1A1-AS1Q5TC04 95 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 LRRN1Q6UXK5 716 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 SLC35D2Q76EJ3 337 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ERASQ7Z444 233 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ZNF440Q8IYI8 595 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 ST8SIA1Q92185 356 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 DVL3Q92997 716 aaPredicted RBP5.1□□□□□ -1.59
SCLT1-207ENST00000506233 EMC6Q9BV81 110 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 TMEM27Q9HBJ8 222 aa5.1□□□□□ -1.59
SCLT1-207ENST00000506233 HMG20AQ9NP66 347 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms