RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HIST2H3PS2Q5TEC6 136 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 ANGPTL5Q86XS5 388 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 FGGYQ96C11 551 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 RBM18Q96H35 190 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 LRFN5Q96NI6 719 aa11.66□□□□□ -0.54
GAPVD1-220ENST00000497580 CDRT15L2A8MXV6 281 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC33A1O00400 549 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 TAAR5O14804 337 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 AHSA1O95433 338 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 ZNF708P17019 499 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR5H2Q8NGV7 314 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 LCN9Q8WX39 176 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 MUCL1Q96DR8 90 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 GALNT14Q96FL9 552 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 SPACA7Q96KW9 195 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 GNRHR2Q96P88 292 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR2M4Q96R27 311 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 FREM3P0C091 2139 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 A0A087WUJ7 227 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 MPZL1O95297 269 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 NUTF2P61970 127 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC35A1P78382 337 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 TMEM268Q5VZI3 342 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 PLXDC2Q6UX71 529 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR4C3Q8NH37 302 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 GPBAR1Q8TDU6 330 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 FRZBQ92765 325 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 TSPAN32Q96QS1 320 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR8B4Q96RC9 309 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 DAPP1Q9UN19 280 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 CYP8B1Q9UNU6 501 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 TUBG1P23258 451 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 PEBP1P30086 187 aaKnown RBP11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 GABRA4P48169 554 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 TANGO2Q6ICL3 276 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 FAHD2BQ6P2I3 314 aaPredicted RBP11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 DGAT2L6Q6ZPD8 337 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 SLC39A11Q8N1S5 342 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 MFSD9Q8NBP5 474 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OTOSQ8NHW6 89 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 FNDC9Q8TBE3 224 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 AQP3Q92482 292 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 FAHD2AQ96GK7 314 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 OR14J1Q9UGF5 321 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 HHLA2Q9UM44 414 aa11.65□□□□□ -0.54
GAPVD1-220ENST00000497580 LOC101059948A0A1B0GTJ6 334 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PRRT4C9JH25 899 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 ADAM10O14672 748 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PGA4P0DJD7 388 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PGA5P0DJD9 388 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 EDN3P14138 238 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 DLK1P80370 383 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 RELQ04864 619 aaPredicted RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 SLC18B1Q6NT16 456 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 HPSE2Q8WWQ2 592 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PRRX2Q99811 253 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 DDA1Q9BW61 102 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 EHFQ9NZC4 300 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 IL17BQ9UHF5 180 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 BORCS7-ASMTA0A0B4J1R7 106 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 HRKO00198 91 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 TNFSF12O43508 249 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 CSF2RAP15509 400 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 EGR3Q06889 387 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 OPN5Q6U736 354 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PEG10Q86TG7 708 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 POC1AQ8NBT0 407 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 METTL21AQ8WXB1 218 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 MVB12AQ96EY5 273 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 HSF4Q9ULV5 492 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 FANCMQ8IYD8 2048 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 EML5Q05BV3 1969 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 PTBP3O95758 552 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 NUDT14O95848 222 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 CSNK2A1P68400 391 aaPredicted RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 CEBPEQ15744 281 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 ZFP62Q8NB50 900 aaPredicted RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 CSNK2A3Q8NEV1 391 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 OR2L8Q8NGY9 312 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 WFIKKN2Q8TEU8 576 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 MBNL1Q9NR56 388 aaKnown RBP11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 TP53TG5Q9Y2B4 290 aa11.64□□□□□ -0.55
GAPVD1-220ENST00000497580 ZNF205O95201 554 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 APBB3O95704 486 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 NUBP1P53384 320 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 SUPT4H1P63272 117 aaKnown RBP11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 UNC119Q13432 240 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 ELOBQ15370 118 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 CLEC12BQ2HXU8 276 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 MED25Q71SY5 747 aa11.63□□□□□ -0.55
GAPVD1-220ENST00000497580 CBLN4Q9NTU7 201 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms