RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 GAL3ST1Q99999 423 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 ADAT1Q9BUB4 502 aaKnown RBP13.87□□□□□ -0.19
SF3A1-209ENST00000496189 TMEM106BQ9NUM4 274 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
SF3A1-209ENST00000496189 LPAR3Q9UBY5 353 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 AASSQ9UDR5 926 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 PCDHB10Q9UN67 800 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 COPS3Q9UNS2 423 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 WIPI2Q9Y4P8 454 aa13.87□□□□□ -0.19
SF3A1-209ENST00000496189 TMEM269A0A1B0GVZ9 245 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 A0A1W2PQL4 384 aaPredicted RBP13.86□□□□□ -0.19
SF3A1-209ENST00000496189 DAPL1A0PJW8 107 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 B4DSR2 109 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CLIC3O95833 236 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 GNALP38405 381 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 ISL1P61371 349 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 RAB40BQ12829 278 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CHRFAM7AQ494W8 412 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 FAM220AQ7Z4H9 259 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 ACBD7Q8N6N7 88 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CELF2-AS1Q8N7Q2 184 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CSNK2A3Q8NEV1 391 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 OR11L1Q8NGX0 322 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 TFAP2CQ92754 450 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 MEGF10Q96KG7 1140 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 SHARPINQ9H0F6 387 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 TMEM160Q9NX00 188 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CDC42EP3Q9UKI2 254 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 EXOGQ9Y2C4 368 aaKnown RBP13.86□□□□□ -0.19
SF3A1-209ENST00000496189 NPTNQ9Y639 398 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 CACNG2Q9Y698 323 aa13.86□□□□□ -0.19
SF3A1-209ENST00000496189 F5H5P2 479 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 PSMD9O00233 223 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 SULT1C4O75897 302 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 HLA-DPB1P04440 258 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 CA6P23280 308 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 AQP4P55087 323 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 PRSS12P56730 875 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 KCTD20Q7Z5Y7 419 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 THAP5Q7Z6K1 395 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 GLCCI1Q86VQ1 547 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 COMMD2Q86X83 199 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 MUC20Q8N307 709 aaPredicted RBP13.85□□□□□ -0.19
SF3A1-209ENST00000496189 KLHL36Q8N4N3 616 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 SPICQ8N5J4 248 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 YIPF7Q8N8F6 280 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 OR8S1Q8NH09 359 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 APH1BQ8WW43 257 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 ERGIC1Q969X5 290 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 SPSB4Q96A44 273 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 LGALS12Q96DT0 336 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 BEX2Q9BXY8 128 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 TTTY10Q9BZA0 68 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 ZNF665Q9H7R5 613 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 AMBNQ9NP70 447 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 INPP5EQ9NRR6 644 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 C14orf119Q9NWQ9 140 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 CSPG4Q6UVK1 2322 aa13.85□□□□□ -0.19
SF3A1-209ENST00000496189 SETD2Q9BYW2 2564 aaPredicted RBP13.84□□□□□ -0.19
SF3A1-209ENST00000496189 ZANQ9Y493 2812 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 METTL15A6NJ78 407 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 H0YL77 283 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 MLNRO43193 412 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 CRLF1O75462 422 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 WBP4O75554 376 aaKnown RBP13.84□□□□□ -0.19
SF3A1-209ENST00000496189 VHLP40337 213 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 MMP16P51512 607 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 ACTA2P62736 377 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 ACTG2P63267 376 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 IZUMO2Q6UXV1 221 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 OR56B2PQ8NGI1 322 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 OR51F2Q8NH61 342 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 CNIH3Q8TBE1 160 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 ITFG2Q969R8 447 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 MOB1AQ9H8S9 216 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 GCM1Q9NP62 436 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 MRPS18AQ9NVS2 196 aaKnown RBP13.84□□□□□ -0.19
SF3A1-209ENST00000496189 UBAP1Q9NZ09 502 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 GTF2A1LQ9UNN4 478 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
SF3A1-209ENST00000496189 NSD1Q96L73 2696 aaPredicted RBP13.83□□□□□ -0.2
SF3A1-209ENST00000496189 ABCA1O95477 2261 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 TLN2Q9Y4G6 2542 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 LOC110117498-PIK3R3F6TDL0 507 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 J3QRE1 110 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 GNAO1P09471 354 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 IL2RGP31785 369 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 CD200P41217 278 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 BTG1P62324 171 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 MED21Q13503 144 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 PRSS45Q7RTY3 260 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 MOGAT3Q86VF5 341 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 EGFL6Q8IUX8 553 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 RFLNBQ8N5W9 214 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 SGK3Q96BR1 496 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 FN3KRPQ9HA64 309 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 ABCB9Q9NP78 766 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 MRM2Q9UI43 246 aaKnown RBP13.83□□□□□ -0.2
SF3A1-209ENST00000496189 SNX5Q9Y5X3 404 aa13.83□□□□□ -0.2
SF3A1-209ENST00000496189 R4GMQ9 66 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms