RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 BCKDHBP21953 392 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 NAMPTP43490 491 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 UQCRFS1P47985 274 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 RPS15P62841 145 aaKnown RBP2.67□□□□□ -1.98
SMC4-224ENST00000494612 LIPEQ05469 1076 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 IL18Q14116 193 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 ZNF266Q14584 549 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 ABHD12BQ7Z5M8 362 aaPredicted RBP2.67□□□□□ -1.98
SMC4-224ENST00000494612 LUZP2Q86TE4 346 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 BIVMQ86UB2 503 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 IQCKQ8N0W5 287 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 OR2L8Q8NGY9 312 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 LYPD6BQ8NI32 183 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 NUBPLQ8TB37 319 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 PEX13Q92968 403 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 MICU1Q9BPX6 476 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 SPNS1Q9H2V7 528 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 CTSFQ9UBX1 484 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 LGALS13Q9UHV8 139 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 MYH1P12882 1939 aa2.67□□□□□ -1.98
SMC4-224ENST00000494612 TRANK1O15050 2925 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 C5orf42Q9H799 3197 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 COL11A1P12107 1806 aaPredicted RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 IGLV1-36A0A0B4J1U3 117 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 TRBV11-1A0A0K0K1C0 115 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 SUPT3HB4E1H0 165 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 SMKR1H3BMG3 65 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 BOLA2-SMG1P6H3BVE0 249 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 EIF4E2O60573 245 aaKnown RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 CLDN11O75508 207 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 ADRA2AP08913 450 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 RHOXF2BP0C7M4 288 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 POLR2MP0CAP2 368 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 OR8G3PP0DMU2 310 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 CX3CR1P49238 355 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 RAB10P61026 200 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 CDH17Q12864 832 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 OR7A5Q15622 319 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 GPR107Q5VW38 600 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 TTC19Q6DKK2 380 aaPredicted RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 FBXW12Q6X9E4 464 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 CERS6Q6ZMG9 384 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 BZW1Q7L1Q6 419 aaKnown RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 OTUD6AQ7L8S5 288 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 CMC1Q7Z7K0 106 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 METTL13Q8N6R0 699 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 ZNF321PQ8N8H1 164 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 C15orf56Q8N910 161 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 PHOSPHO2Q8TCD6 241 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 NEURL3Q96EH8 262 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 DNAJC1Q96KC8 554 aaKnown RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 BPIFA3Q9BQP9 254 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 IQCGQ9H095 443 aaKnown RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 ZNF430Q9H8G1 570 aaPredicted RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 FAM49BQ9NUQ9 324 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 ZNF282Q9UDV7 671 aaPredicted RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 YTHDF2Q9Y5A9 579 aaKnown RBP2.66□□□□□ -1.98
SMC4-224ENST00000494612 BDP1A6H8Y1 2624 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 MYH8P13535 1937 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 MYO9BQ13459 2157 aa2.66□□□□□ -1.98
SMC4-224ENST00000494612 SIP14410 1827 aa2.65□□□□□ -1.98
SMC4-224ENST00000494612 PARP14Q460N5 1801 aa2.65□□□□□ -1.98
SMC4-224ENST00000494612 CFAP54Q96N23 3096 aa2.65□□□□□ -1.98
SMC4-224ENST00000494612 NAV1Q8NEY1 1877 aa2.65□□□□□ -1.98
SMC4-224ENST00000494612 TANC1Q9C0D5 1861 aa2.65□□□□□ -1.98
SMC4-224ENST00000494612 ARID1AO14497 2285 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 B4GALT5O43286 388 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 HUS1O60921 280 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 SNAI1O95863 264 aaPredicted RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 MRPL3P09001 348 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 F2RP25116 425 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 MAGEA1P43355 309 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 RAB7AP51149 207 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 VSX2P58304 361 aaPredicted RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 DYNLL1P63167 89 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 ARG2P78540 354 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 SP4Q02446 784 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 SYCNQ0VAF6 134 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 MERTKQ12866 999 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 ILKQ13418 452 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 EIF4EBP1Q13541 118 aaPredicted RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 PON2Q15165 354 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 SF3A2Q15428 464 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 ZNF726P1Q15940 193 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 PSMD5Q16401 504 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 THEM4Q5T1C6 240 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 FAM71E1Q6IPT2 247 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 NANOGP8Q6NSW7 305 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 MRPL55Q7Z7F7 128 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 TMEM150AQ86TG1 271 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 COMMD1Q8N668 190 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 OR10AD1Q8NGE0 317 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 OR2A1Q8NGT9 310 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 ABHD3Q8WU67 409 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 ZNF681Q96N22 645 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 COL21A1Q96P44 957 aa2.65□□□□□ -1.99
SMC4-224ENST00000494612 TGS1Q96RS0 853 aaKnown RBP2.65□□□□□ -1.99
SMC4-224ENST00000494612 BCL7BQ9BQE9 202 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms